Variant report

Variant	rs10113048
Chromosome Location	chr8:91607285-91607286
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:91604199..91608831-chr8:91656344..91658872,6	MCF-7	breast:
2	chr8:91605734..91608426-chr8:91612551..91614640,3	MCF-7	breast:
3	chr8:91601371..91603552-chr8:91605415..91607514,2	K562	blood:
4	chr8:91607089..91608084-chr8:91657745..91658427,2	MCF-7	breast:
5	chr8:91605465..91608081-chr8:91613151..91614817,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000246792	Chromatin interaction
ENSG00000180694	Chromatin interaction

Extended variants
information (count: 68 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:68)

rs_ID	r²[population]
rs10046720	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10086275	0.84[AMR][1000 genomes]
rs10092300	0.84[AMR][1000 genomes]
rs10092582	0.84[AMR][1000 genomes]
rs10093669	0.84[AMR][1000 genomes]
rs10094321	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10095430	0.84[AMR][1000 genomes]
rs10096820	0.84[AMR][1000 genomes]
rs10098293	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10098726	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10101828	0.84[AMR][1000 genomes]
rs10101918	0.84[AMR][1000 genomes]
rs10103494	0.84[AMR][1000 genomes]
rs10103796	0.84[AMR][1000 genomes]
rs10105322	0.84[AMR][1000 genomes]
rs10106913	0.84[AMR][1000 genomes]
rs10111672	0.84[AMR][1000 genomes]
rs10283082	0.84[AMR][1000 genomes]
rs10283102	0.84[AMR][1000 genomes]
rs10504896	0.84[AMR][1000 genomes]
rs16904906	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16904915	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16904920	0.91[AMR][1000 genomes]
rs16905034	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16905035	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16905036	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28457745	0.84[AMR][1000 genomes]
rs28489185	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28495879	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28525018	0.84[AMR][1000 genomes]
rs28529000	0.84[AMR][1000 genomes]
rs28552751	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28555480	0.91[AMR][1000 genomes]
rs28557468	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28604570	0.91[AMR][1000 genomes]
rs28620201	0.84[AMR][1000 genomes]
rs28623085	0.84[AMR][1000 genomes]
rs28624189	0.84[AMR][1000 genomes]
rs28631038	0.84[AMR][1000 genomes]
rs28644172	0.84[AMR][1000 genomes]
rs28654367	0.84[AMR][1000 genomes]
rs28669236	0.84[AMR][1000 genomes]
rs28680836	0.84[AMR][1000 genomes]
rs28690036	0.84[AMR][1000 genomes]
rs28712771	0.84[AMR][1000 genomes]
rs56021347	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56061891	0.84[AMR][1000 genomes]
rs56187777	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692314	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692315	0.84[AMR][1000 genomes]
rs73692316	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692438	0.84[AMR][1000 genomes]
rs73692439	0.84[AMR][1000 genomes]
rs73692448	0.84[AMR][1000 genomes]
rs73692449	0.84[AMR][1000 genomes]
rs73692450	0.84[AMR][1000 genomes]
rs73692452	0.84[AMR][1000 genomes]
rs73692453	0.84[AMR][1000 genomes]
rs73692470	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692595	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692598	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73692600	0.96[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs73692602	0.84[AMR][1000 genomes]
rs73694003	0.84[AMR][1000 genomes]
rs73694004	0.84[AMR][1000 genomes]
rs73694005	0.84[AMR][1000 genomes]
rs9297873	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9297878	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91594600-91621600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:91606200-91607800	Enhancers	Brain Germinal Matrix	brain
3	chr8:91606200-91609200	Weak transcription	HMEC	breast
4	chr8:91606600-91610400	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr8:91606600-91621800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr8:91606600-91627600	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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