Variant report

Variant	rs10096924
Chromosome Location	chr8:91211738-91211739
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:91209392..91211904-chr8:91213092..91216334,3	K562	blood:
2	chr8:91210550..91212657-chr8:91237751..91239928,2	K562	blood:
3	chr8:91210166..91212699-chr8:91233871..91237591,3	K562	blood:
4	chr8:91180601..91182889-chr8:91210829..91212948,2	K562	blood:
5	chr8:91197950..91200166-chr8:91210110..91212853,2	K562	blood:
6	chr8:91204870..91208091-chr8:91210126..91212391,3	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10086980	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12679473	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12679792	0.81[AFR][1000 genomes]
rs12679936	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12681301	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12682044	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13253603	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13275049	0.87[ASN][1000 genomes]
rs13276534	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13439055	0.83[ASN][1000 genomes]
rs16904163	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2056839	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2056840	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2158222	0.86[AFR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2189258	0.93[ASN][1000 genomes]
rs2339108	0.90[AFR][1000 genomes];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2339109	0.80[AFR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs28461789	0.81[AFR][1000 genomes]
rs28465357	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs33958462	0.81[EUR][1000 genomes]
rs4961179	0.81[AFR][1000 genomes]
rs4961181	0.81[AFR][1000 genomes]
rs4961182	0.81[AFR][1000 genomes]
rs62530359	0.80[AFR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs67438267	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7842660	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9642892	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9643256	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9643257	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs968950	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758164	chr8:91000786-91329669	Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	esv2759628	chr8:91000786-91329669	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	esv2757281	chr8:91090821-91235335	Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	nsv470225	chr8:91113616-91229254	Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
5	nsv891184	chr8:91114698-91222654	Active TSS Genic enhancers Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
6	esv35109	chr8:91150726-91226940	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	8 gene(s)	inside rSNPs	diseases
7	nsv818643	chr8:91153308-91212148	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers	Chromatin interactive region	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91211400-91212000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr8:91211400-91213200	ZNF genes & repeats	K562	blood

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