Variant report

Variant	rs10124931
Chromosome Location	chr9:92701272-92701273
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:92699147..92701279-chr9:92703484..92705697,2	K562	blood:
2	chr9:92682411..92684734-chr9:92700082..92701810,2	MCF-7	breast:
3	chr9:92687092..92689404-chr9:92701251..92704588,3	MCF-7	breast:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10118987	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10119836	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10121885	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10991825	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12348128	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16905909	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16905942	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs16905944	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs16905946	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs28375233	1.00[YRI][hapmap]
rs28391004	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28451518	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28588897	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28615383	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2890108	1.00[CEU][hapmap];0.90[CHB][hapmap];0.92[JPT][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs58357255	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs58839052	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs59021050	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs59052558	0.85[ASN][1000 genomes]
rs59127989	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs59750037	0.83[ASN][1000 genomes]
rs60120851	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs60144596	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs61492835	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs7018468	1.00[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73649353	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs749195	0.82[AMR][1000 genomes];0.83[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92693200-92703000	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr9:92693600-92703000	Weak transcription	NHDF-Ad	bronchial
3	chr9:92695800-92703800	Weak transcription	Aorta	Aorta
4	chr9:92698200-92701800	Weak transcription	Ovary	ovary
5	chr9:92698200-92704400	Weak transcription	Duodenum Smooth Muscle	Duodenum
6	chr9:92698400-92701600	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr9:92698400-92703800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr9:92698400-92703800	Weak transcription	Psoas Muscle	Psoas
9	chr9:92698800-92703000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr9:92698800-92703800	Weak transcription	Colon Smooth Muscle	Colon
11	chr9:92698800-92703800	Weak transcription	Rectal Smooth Muscle	rectum
12	chr9:92698800-92704000	Weak transcription	Right Atrium	heart
13	chr9:92701000-92702600	Enhancers	Primary hematopoietic stem cells	blood
14	chr9:92701200-92702800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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