Variant report

Variant	rs58357255
Chromosome Location	chr9:92715040-92715041
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:92712626..92715302-chr9:92716416..92719333,3	MCF-7	breast:
2	chr9:92709715..92711807-chr9:92713362..92716439,3	MCF-7	breast:
3	chr9:92714067..92716934-chr9:92720447..92722876,2	MCF-7	breast:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10118987	0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10119836	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10121885	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10124931	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10991825	0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12348128	0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16905909	0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16905942	0.92[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs16905944	0.92[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs16905946	0.92[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs28391004	0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs28451518	0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs28588897	0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs28615383	0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2890108	0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs57418071	0.85[AMR][1000 genomes]
rs58839052	0.92[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs59021050	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs59052558	1.00[ASN][1000 genomes]
rs59127989	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs59750037	0.85[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs60120851	0.99[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs60144596	0.92[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs61492835	0.92[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs7018468	0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7036239	0.83[ASN][1000 genomes]
rs73649353	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs749195	0.92[AMR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92705600-92719200	Weak transcription	Ovary	ovary
2	chr9:92706000-92723600	Weak transcription	HSMMtube	muscle
3	chr9:92707000-92716200	Weak transcription	Psoas Muscle	Psoas
4	chr9:92707000-92716200	Weak transcription	Stomach Smooth Muscle	stomach
5	chr9:92711800-92715800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr9:92711800-92716200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr9:92713400-92715800	Enhancers	NHLF	lung
8	chr9:92713600-92715800	Enhancers	NHDF-Ad	bronchial
9	chr9:92713600-92716200	Weak transcription	Lung	lung
10	chr9:92713600-92718400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr9:92714000-92715200	Enhancers	HSMM	muscle
12	chr9:92714000-92715400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
13	chr9:92714200-92715600	Enhancers	Osteobl	bone
14	chr9:92714200-92718400	Enhancers	Fetal Stomach	stomach
15	chr9:92714400-92715400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr9:92714400-92716200	Weak transcription	Adipose Nuclei	Adipose
17	chr9:92714400-92716200	Weak transcription	Brain Anterior Caudate	brain
18	chr9:92714400-92716200	Weak transcription	Left Ventricle	heart
19	chr9:92714600-92715600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr9:92714600-92715600	Enhancers	NHEK	skin
21	chr9:92714800-92715200	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr9:92714800-92715200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr9:92714800-92716400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr9:92715000-92715200	Enhancers	Muscle Satellite Cultured Cells	--
25	chr9:92715000-92715200	Enhancers	Fetal Lung	lung
26	chr9:92715000-92715400	Enhancers	GM12878-XiMat	blood
27	chr9:92715000-92715400	Enhancers	NH-A	brain
28	chr9:92715000-92715600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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