Variant report

Variant	rs57418071
Chromosome Location	chr9:92716000-92716001
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:92709715..92711807-chr9:92713362..92716439,3	MCF-7	breast:
2	chr9:92714067..92716934-chr9:92720447..92722876,2	MCF-7	breast:

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10993587	0.85[EUR][1000 genomes]
rs16905942	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs16905944	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs16905946	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs16906012	0.87[EUR][1000 genomes]
rs16906019	0.87[EUR][1000 genomes]
rs16906030	0.87[EUR][1000 genomes]
rs16906038	0.85[EUR][1000 genomes]
rs16906046	0.87[EUR][1000 genomes]
rs2099918	0.87[EUR][1000 genomes]
rs2119293	0.87[EUR][1000 genomes]
rs2890110	0.85[EUR][1000 genomes]
rs58357255	0.85[AMR][1000 genomes]
rs58839052	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs59021050	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs59750037	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs60144596	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs60994320	0.88[EUR][1000 genomes]
rs61344087	0.86[EUR][1000 genomes]
rs61492835	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs749195	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92705600-92719200	Weak transcription	Ovary	ovary
2	chr9:92706000-92723600	Weak transcription	HSMMtube	muscle
3	chr9:92707000-92716200	Weak transcription	Psoas Muscle	Psoas
4	chr9:92707000-92716200	Weak transcription	Stomach Smooth Muscle	stomach
5	chr9:92711800-92716200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr9:92713600-92716200	Weak transcription	Lung	lung
7	chr9:92713600-92718400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr9:92714200-92718400	Enhancers	Fetal Stomach	stomach
9	chr9:92714400-92716200	Weak transcription	Adipose Nuclei	Adipose
10	chr9:92714400-92716200	Weak transcription	Brain Anterior Caudate	brain
11	chr9:92714400-92716200	Weak transcription	Left Ventricle	heart
12	chr9:92714800-92716400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr9:92715200-92716200	Weak transcription	Fetal Lung	lung
14	chr9:92715200-92716600	Enhancers	Primary T cells fromperipheralblood	blood
15	chr9:92715200-92716800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
16	chr9:92715200-92717200	Enhancers	Skeletal Muscle Male	skeletal muscle
17	chr9:92715400-92716200	Weak transcription	Skeletal Muscle Female	skeletal muscle
18	chr9:92715600-92717000	Enhancers	Stomach Mucosa	stomach
19	chr9:92715800-92716200	Weak transcription	NHDF-Ad	bronchial
20	chr9:92715800-92717200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
21	chr9:92716000-92716200	Weak transcription	Rectal Smooth Muscle	rectum
22	chr9:92716000-92716600	Enhancers	Cortex derived primary cultured neurospheres	brain
23	chr9:92716000-92716800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
24	chr9:92716000-92717600	Enhancers	Fetal Muscle Leg	muscle

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