Variant report

Variant	rs59021050
Chromosome Location	chr9:92705260-92705261
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr9:92696162..92698839-chr9:92703402..92705829,2	MCF-7	breast:
2	chr9:92218435..92219998-chr9:92703276..92705546,2	MCF-7	breast:
3	chr9:92699147..92701279-chr9:92703484..92705697,2	K562	blood:
4	chr1:216119789..216122562-chr9:92704177..92706793,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000130222	Chromatin interaction

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10118987	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10119836	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10121885	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10124931	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10991825	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12348128	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16905909	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16905942	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs16905944	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs16905946	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs28391004	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28451518	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28588897	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28615383	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2890108	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs57418071	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs58357255	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs58839052	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs59052558	0.87[ASN][1000 genomes]
rs59127989	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs59750037	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs60120851	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs60144596	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs61492835	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs7018468	0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73649353	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs749195	0.88[AMR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92701800-92705600	Enhancers	Ovary	ovary
2	chr9:92703000-92706000	Enhancers	HSMM	muscle
3	chr9:92703000-92706200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr9:92703000-92706400	Enhancers	Stomach Smooth Muscle	stomach
5	chr9:92703000-92707000	Enhancers	Skeletal Muscle Female	skeletal muscle
6	chr9:92703200-92706000	Enhancers	HSMMtube	muscle
7	chr9:92703800-92705600	Enhancers	Pancreatic Islets	Pancreatic Islet
8	chr9:92703800-92705600	Enhancers	Placenta Amnion	Placenta Amnion
9	chr9:92703800-92705800	Bivalent Enhancer	Fetal Muscle Leg	muscle
10	chr9:92703800-92707000	Enhancers	Psoas Muscle	Psoas
11	chr9:92703800-92709800	Enhancers	Colon Smooth Muscle	Colon
12	chr9:92704400-92705600	Enhancers	Duodenum Smooth Muscle	Duodenum
13	chr9:92704400-92708800	Weak transcription	Brain Germinal Matrix	brain
14	chr9:92704600-92706000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr9:92704800-92705600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
16	chr9:92704800-92705600	Weak transcription	Pancreas	Pancrea
17	chr9:92704800-92706200	Enhancers	Skeletal Muscle Male	skeletal muscle
18	chr9:92704800-92707000	Bivalent Enhancer	Fetal Stomach	stomach
19	chr9:92704800-92708600	Weak transcription	NHDF-Ad	bronchial
20	chr9:92705000-92705400	Bivalent Enhancer	Fetal Muscle Trunk	muscle
21	chr9:92705000-92709800	Enhancers	Rectal Smooth Muscle	rectum
22	chr9:92705200-92705400	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung

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