Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr20:45988308..45989977-chr9:92733096..92734678,2	MCF-7	breast:
2	chr9:92220536..92222914-chr9:92732906..92734901,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1036699	0.96[ASN][1000 genomes]
rs10993587	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12350621	0.96[ASN][1000 genomes]
rs16905942	0.95[EUR][1000 genomes]
rs16905944	0.94[EUR][1000 genomes]
rs16905946	0.95[EUR][1000 genomes]
rs16906012	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16906019	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16906030	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16906038	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16906046	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2099918	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2119293	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2890109	0.81[EUR][1000 genomes]
rs2890110	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57418071	0.86[EUR][1000 genomes]
rs57835569	0.96[ASN][1000 genomes]
rs58400952	0.98[ASN][1000 genomes]
rs58839052	0.95[EUR][1000 genomes]
rs59750037	0.95[EUR][1000 genomes]
rs60144596	0.95[EUR][1000 genomes]
rs60994320	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61492835	0.95[EUR][1000 genomes]
rs72755008	0.96[ASN][1000 genomes]
rs72755009	0.96[ASN][1000 genomes]
rs72755011	0.96[ASN][1000 genomes]
rs72755015	0.96[ASN][1000 genomes]
rs72755016	0.95[ASN][1000 genomes]
rs749195	0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893561	chr9:92732368-92802101	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92725600-92738200	Weak transcription	Lung	lung
2	chr9:92729600-92733800	Enhancers	Fetal Intestine Small	intestine
3	chr9:92730800-92733800	Enhancers	Fetal Intestine Large	intestine
4	chr9:92732000-92733400	Weak transcription	HSMMtube	muscle
5	chr9:92732400-92733400	Enhancers	Sigmoid Colon	Sigmoid Colon
6	chr9:92732600-92733400	Enhancers	Rectal Mucosa Donor 29	rectum
7	chr9:92732600-92733600	Enhancers	Rectal Mucosa Donor 31	rectum
8	chr9:92732800-92733400	Enhancers	Monocytes-CD14+_RO01746	blood
9	chr9:92733000-92733600	Enhancers	Colonic Mucosa	Colon
10	chr9:92733000-92736600	Weak transcription	Primary monocytes fromperipheralblood	blood

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