Variant report
| Variant | rs10156108 |
|---|---|
| Chromosome Location | chr7:147422333-147422334 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:39)
| rs_ID | r2[population] |
|---|---|
| rs10155998 | 1.00[CHB][hapmap];0.86[JPT][hapmap] |
| rs10225143 | 0.86[JPT][hapmap] |
| rs10231699 | 1.00[CHB][hapmap] |
| rs10245935 | 1.00[CHB][hapmap] |
| rs10253551 | 1.00[CHB][hapmap];0.86[YRI][hapmap] |
| rs10259955 | 1.00[CHB][hapmap] |
| rs10952708 | 1.00[CHB][hapmap] |
| rs10952709 | 1.00[CHB][hapmap];0.86[JPT][hapmap] |
| rs10952710 | 1.00[CHB][hapmap] |
| rs10952711 | 1.00[JPT][hapmap] |
| rs10952713 | 1.00[CHB][hapmap];1.00[EUR][1000 genomes] |
| rs1101041 | 0.95[ASN][1000 genomes] |
| rs1106439 | 0.86[JPT][hapmap] |
| rs11766799 | 1.00[CHB][hapmap];0.95[ASN][1000 genomes] |
| rs11971275 | 1.00[CHB][hapmap] |
| rs12155395 | 1.00[CHB][hapmap] |
| rs12531829 | 1.00[EUR][1000 genomes] |
| rs12531831 | 1.00[EUR][1000 genomes] |
| rs12532190 | 1.00[EUR][1000 genomes] |
| rs12532660 | 1.00[EUR][1000 genomes] |
| rs12534449 | 1.00[EUR][1000 genomes] |
| rs12536848 | 1.00[EUR][1000 genomes] |
| rs12538275 | 1.00[EUR][1000 genomes] |
| rs12539452 | 1.00[CHB][hapmap];1.00[EUR][1000 genomes] |
| rs12666318 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs12703973 | 0.84[JPT][hapmap] |
| rs1525252 | 1.00[EUR][1000 genomes] |
| rs1525265 | 1.00[EUR][1000 genomes] |
| rs1525266 | 1.00[EUR][1000 genomes] |
| rs16883690 | 1.00[CHB][hapmap] |
| rs4726890 | 1.00[CHB][hapmap] |
| rs6955939 | 0.86[JPT][hapmap] |
| rs6961273 | 0.97[ASN][1000 genomes] |
| rs6965796 | 0.97[ASN][1000 genomes] |
| rs7457261 | 1.00[EUR][1000 genomes] |
| rs7791979 | 0.86[JPT][hapmap] |
| rs7799600 | 1.00[CHB][hapmap] |
| rs851653 | 0.86[JPT][hapmap];0.95[ASN][1000 genomes] |
| rs851654 | 0.86[JPT][hapmap];0.95[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr7:147421800-147422400 | Enhancers | Brain Substantia Nigra | brain |
