Variant report

Variant	rs4726890
Chromosome Location	chr7:147440839-147440840
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10085572	1.00[CEU][hapmap]
rs10155998	1.00[CHB][hapmap]
rs10156108	1.00[CHB][hapmap]
rs10229178	0.91[ASN][1000 genomes]
rs10231699	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10245935	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10252313	1.00[CEU][hapmap]
rs10253551	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10254338	1.00[CEU][hapmap]
rs10259955	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10264316	1.00[CEU][hapmap]
rs10278677	1.00[CEU][hapmap]
rs10488353	1.00[CEU][hapmap]
rs10952708	1.00[CHB][hapmap];0.95[ASN][1000 genomes]
rs10952709	1.00[CHB][hapmap]
rs10952710	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10952713	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11766799	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11971275	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12155395	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12539452	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12666318	1.00[CHB][hapmap]
rs1525256	1.00[CEU][hapmap]
rs1525258	1.00[CEU][hapmap]
rs16883690	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs16883720	1.00[CEU][hapmap]
rs17170691	1.00[CEU][hapmap]
rs17170714	1.00[CEU][hapmap]
rs17170743	1.00[CEU][hapmap]
rs2049469	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs2080155	1.00[CEU][hapmap]
rs2373272	1.00[CEU][hapmap]
rs2888516	1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs6953679	1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs6977961	1.00[CEU][hapmap]
rs73458209	1.00[ASN][1000 genomes]
rs73458234	1.00[ASN][1000 genomes]
rs73472857	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7799600	1.00[CHB][hapmap]
rs7809690	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs954112	1.00[JPT][hapmap];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933973	chr7:147438206-147549993	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147440800-147441000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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