Variant report
| Variant | rs10197496 |
|---|---|
| Chromosome Location | chr2:209429683-209429684 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:3 , 50 per page) page:
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| No data |
| No data |
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rSNPs within LD-proxies of this variant (count:27)
| rs_ID | r2[population] |
|---|---|
| rs10172724 | 1.00[ASN][1000 genomes] |
| rs10172914 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
| rs10182685 | 0.86[ASN][1000 genomes] |
| rs10190717 | 0.86[ASN][1000 genomes] |
| rs10210510 | 0.93[ASN][1000 genomes] |
| rs10497902 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes] |
| rs11899172 | 0.89[ASN][1000 genomes] |
| rs12476735 | 0.80[ASN][1000 genomes] |
| rs13385546 | 0.93[ASN][1000 genomes] |
| rs13389400 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs13391882 | 0.89[ASN][1000 genomes] |
| rs13415155 | 0.96[ASN][1000 genomes] |
| rs13418028 | 0.86[ASN][1000 genomes] |
| rs1370377 | 1.00[CHB][hapmap] |
| rs1454317 | 1.00[ASN][1000 genomes] |
| rs1595329 | 1.00[JPT][hapmap] |
| rs1869534 | 0.89[ASN][1000 genomes] |
| rs1869535 | 0.89[ASN][1000 genomes] |
| rs56875378 | 0.96[ASN][1000 genomes] |
| rs57164492 | 0.96[ASN][1000 genomes] |
| rs58644588 | 0.96[ASN][1000 genomes] |
| rs6732373 | 0.89[ASN][1000 genomes] |
| rs6752329 | 0.89[ASN][1000 genomes] |
| rs72981036 | 0.93[ASN][1000 genomes] |
| rs7595880 | 0.89[ASN][1000 genomes] |
| rs7605626 | 0.86[ASN][1000 genomes] |
| rs9288394 | 0.93[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:209422800-209430000 | Weak transcription | K562 | blood |
