Variant report

Variant	rs10182685
Chromosome Location	chr2:209413159-209413160
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:209405403..209410609-chr2:209410620..209413858,6	K562	blood:
2	chr2:209405990..209410694-chr2:209410728..209415214,7	K562	blood:

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10172724	0.86[ASN][1000 genomes]
rs10172914	0.86[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs10182087	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs10190717	0.93[ASN][1000 genomes]
rs10197496	0.86[ASN][1000 genomes]
rs10208191	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs10208295	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs10210510	0.93[ASN][1000 genomes]
rs10497902	0.86[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.90[ASN][1000 genomes]
rs1057390	1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs11888566	1.00[EUR][1000 genomes]
rs11897897	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs11899172	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11899329	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12476735	0.87[ASN][1000 genomes]
rs13010749	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13385546	0.93[ASN][1000 genomes]
rs13389400	0.86[ASN][1000 genomes]
rs13391882	0.83[ASN][1000 genomes]
rs13415155	0.90[ASN][1000 genomes]
rs13418028	0.80[ASN][1000 genomes]
rs1370375	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1370377	1.00[JPT][hapmap]
rs1454317	0.86[ASN][1000 genomes]
rs1595329	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs16841092	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs16841231	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs16841233	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs16841234	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs16841242	1.00[CHB][hapmap]
rs1869534	0.83[ASN][1000 genomes]
rs1869535	0.90[ASN][1000 genomes]
rs1898436	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs3856350	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs4462735	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs56875378	0.83[ASN][1000 genomes]
rs57164492	0.83[ASN][1000 genomes]
rs58644588	0.83[ASN][1000 genomes]
rs6721780	1.00[JPT][hapmap]
rs6725932	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs6732373	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6752329	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72981036	0.93[ASN][1000 genomes]
rs7583022	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs7595880	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7605626	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9288394	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs959660	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs962595	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs9646839	0.88[CHB][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:209407800-209414400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr2:209410600-209414200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr2:209411200-209414000	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr2:209411400-209413600	Weak transcription	K562	blood
5	chr2:209412800-209413400	Enhancers	Small Intestine	intestine

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