Variant report

Variant	rs1869535
Chromosome Location	chr2:209396549-209396550
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 60 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:60)

rs_ID	r²[population]
rs10172724	0.89[ASN][1000 genomes]
rs10172914	0.86[CHB][hapmap];0.89[ASN][1000 genomes]
rs10182087	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs10182685	0.90[ASN][1000 genomes]
rs10190717	0.83[ASN][1000 genomes]
rs10197496	0.89[ASN][1000 genomes]
rs10208191	0.88[CHB][hapmap];0.85[CHD][hapmap];1.00[JPT][hapmap]
rs10208295	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs10210510	0.82[ASN][1000 genomes]
rs10497902	0.86[CHB][hapmap];0.85[CHD][hapmap];0.80[ASN][1000 genomes]
rs1057390	0.83[ASW][hapmap];0.82[CEU][hapmap];1.00[CHB][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];0.81[MKK][hapmap];0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs11897897	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs11899172	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1259699	1.00[CEU][hapmap];0.88[MEX][hapmap]
rs1259700	1.00[CEU][hapmap]
rs12617780	0.86[ASN][1000 genomes]
rs12991283	0.82[CEU][hapmap]
rs13000248	0.82[CEU][hapmap]
rs13385546	0.82[ASN][1000 genomes]
rs13389400	0.89[ASN][1000 genomes]
rs13391882	0.93[ASN][1000 genomes]
rs13415155	0.93[ASN][1000 genomes]
rs13418028	0.83[ASN][1000 genomes]
rs1370375	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs1370377	1.00[JPT][hapmap]
rs1454317	0.89[ASN][1000 genomes]
rs1595329	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs16841092	0.88[CHB][hapmap];0.85[CHD][hapmap];1.00[JPT][hapmap]
rs16841231	0.88[CHB][hapmap];0.85[CHD][hapmap];1.00[JPT][hapmap]
rs16841233	0.88[CHB][hapmap];0.85[CHD][hapmap];1.00[JPT][hapmap]
rs16841234	0.85[CHB][hapmap];1.00[JPT][hapmap]
rs16841242	1.00[CHB][hapmap];0.85[CHD][hapmap]
rs16841294	0.83[EUR][1000 genomes]
rs1869534	0.93[ASN][1000 genomes]
rs1898436	0.82[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap]
rs35293936	0.82[CEU][hapmap]
rs3856350	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs4462735	0.88[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap]
rs4558530	0.82[ASN][1000 genomes]
rs56875378	0.86[ASN][1000 genomes]
rs57164492	0.86[ASN][1000 genomes]
rs58644588	0.86[ASN][1000 genomes]
rs60916150	0.82[ASN][1000 genomes]
rs61195726	0.82[ASN][1000 genomes]
rs6713477	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs6716615	1.00[CEU][hapmap];0.88[MEX][hapmap];0.83[EUR][1000 genomes]
rs6717082	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs6721780	1.00[JPT][hapmap]
rs6725932	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs6732373	0.86[ASN][1000 genomes]
rs6752329	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72981036	0.82[ASN][1000 genomes]
rs7570304	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7583022	0.88[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs7595880	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7605626	0.90[ASN][1000 genomes]
rs9288394	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs959660	0.88[CHB][hapmap];1.00[JPT][hapmap]
rs962595	0.88[CHB][hapmap];0.85[CHD][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs9646839	0.88[CHB][hapmap];0.85[CHD][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:209395600-209396600	Enhancers	Fetal Heart	heart
2	chr2:209396200-209396600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr2:209396200-209396800	Enhancers	HUES64 Cell Line	embryonic stem cell

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