Variant report

Variant	rs10224175
Chromosome Location	chr7:117287622-117287623
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 77 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:77)

rs_ID	r²[population]
rs10155917	1.00[ASN][1000 genomes]
rs10156138	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10227037	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10230259	1.00[ASN][1000 genomes]
rs10234329	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10240521	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10240654	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10242827	1.00[ASN][1000 genomes]
rs10244810	1.00[ASN][1000 genomes]
rs10249971	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1025342	1.00[ASN][1000 genomes]
rs10258791	1.00[ASN][1000 genomes]
rs10262610	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10262673	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10264450	1.00[ASN][1000 genomes]
rs10264892	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10266649	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10270610	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10276355	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10276431	1.00[EUR][1000 genomes]
rs10278953	1.00[ASN][1000 genomes]
rs10487364	1.00[ASN][1000 genomes]
rs11505934	1.00[EUR][1000 genomes]
rs12536356	1.00[ASN][1000 genomes]
rs17139821	1.00[ASN][1000 genomes]
rs17450482	1.00[ASN][1000 genomes]
rs17544734	1.00[ASN][1000 genomes]
rs17545644	1.00[ASN][1000 genomes]
rs17547485	1.00[ASN][1000 genomes]
rs177071	1.00[ASN][1000 genomes]
rs1800130	1.00[ASN][1000 genomes]
rs1800503	1.00[ASN][1000 genomes]
rs213972	1.00[ASN][1000 genomes]
rs2518872	1.00[ASN][1000 genomes]
rs28449716	1.00[ASN][1000 genomes]
rs28460732	1.00[EUR][1000 genomes]
rs28472519	1.00[ASN][1000 genomes]
rs28517401	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34268361	1.00[ASN][1000 genomes]
rs34420782	1.00[ASN][1000 genomes]
rs34606983	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34654194	1.00[ASN][1000 genomes]
rs34680574	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34739284	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34783030	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35003065	1.00[ASN][1000 genomes]
rs35130797	1.00[ASN][1000 genomes]
rs35191087	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35309708	1.00[EUR][1000 genomes]
rs35342599	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs35358095	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35415299	1.00[ASN][1000 genomes]
rs35615558	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35715578	1.00[ASN][1000 genomes]
rs35731674	1.00[AMR][1000 genomes]
rs35775845	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35777371	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs35820454	1.00[ASN][1000 genomes]
rs35987553	1.00[ASN][1000 genomes]
rs35995554	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36042090	1.00[ASN][1000 genomes]
rs36082161	1.00[ASN][1000 genomes]
rs4148717	1.00[ASN][1000 genomes]
rs4285411	1.00[ASN][1000 genomes]
rs6466610	1.00[ASN][1000 genomes]
rs6466615	1.00[EUR][1000 genomes]
rs6943074	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6965682	1.00[ASN][1000 genomes]
rs6968747	1.00[ASN][1000 genomes]
rs73480763	1.00[ASN][1000 genomes]
rs7779015	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7795896	1.00[ASN][1000 genomes]
rs7799504	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7802924	1.00[ASN][1000 genomes]
rs7808474	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7809485	1.00[ASN][1000 genomes]
rs7812185	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:117245200-117294000	Weak transcription	Pancreas	Pancrea
2	chr7:117286000-117310200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr7:117286600-117288000	Strong transcription	Fetal Intestine Small	intestine
4	chr7:117286600-117289000	Strong transcription	Duodenum Mucosa	Duodenum
5	chr7:117286600-117289400	Strong transcription	Rectal Mucosa Donor 31	rectum
6	chr7:117286800-117293000	Weak transcription	Fetal Intestine Large	intestine
7	chr7:117286800-117294600	Weak transcription	Hela-S3	cervix
8	chr7:117287400-117288800	Strong transcription	Sigmoid Colon	Sigmoid Colon
9	chr7:117287600-117293000	Weak transcription	Rectal Mucosa Donor 29	rectum

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