Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10224696	0.97[EUR][1000 genomes]
rs10240080	0.82[CEU][hapmap];0.97[EUR][1000 genomes]
rs10263419	0.82[CEU][hapmap];0.84[AMR][1000 genomes]
rs10281560	0.97[EUR][1000 genomes]
rs12532676	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12540683	0.97[EUR][1000 genomes]
rs12699010	0.82[CEU][hapmap]
rs12699011	0.87[AMR][1000 genomes]
rs12699012	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12699013	0.82[CEU][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12699032	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17143419	0.82[CEU][hapmap];0.90[EUR][1000 genomes]
rs1882573	0.84[AMR][1000 genomes]
rs2707422	0.93[EUR][1000 genomes]
rs34702051	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35182494	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4305790	0.84[AMR][1000 genomes]
rs4323379	0.84[AMR][1000 genomes]
rs56340632	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62462185	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62462209	0.92[EUR][1000 genomes]
rs6949288	0.80[AMR][1000 genomes]
rs71549400	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7803373	0.82[CEU][hapmap];0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519090	chr7:70085934-71071896	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1015261	chr7:70404302-71255933	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:70784000-70808200	Weak transcription	Aorta	Aorta
2	chr7:70801600-70812600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr7:70801800-70807600	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr7:70802200-70807600	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr7:70805000-70813800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr7:70805200-70813400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr7:70805400-70809400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr7:70805600-70813200	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr7:70805600-70813200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
10	chr7:70807000-70812600	Weak transcription	H1 Cell Line	embryonic stem cell
11	chr7:70807400-70810200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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