Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:122182067..122184519-chr7:122256658..122258935,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10229609	1.00[YRI][hapmap]
rs10235626	0.87[YRI][hapmap]
rs10238269	0.87[YRI][hapmap]
rs10253515	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10258166	0.87[YRI][hapmap]
rs10258309	0.87[YRI][hapmap]
rs10258422	1.00[YRI][hapmap]
rs10269952	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10271472	0.87[YRI][hapmap]
rs10281006	1.00[YRI][hapmap]
rs10441358	1.00[YRI][hapmap]
rs11974367	1.00[YRI][hapmap]
rs11974506	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17380636	0.87[YRI][hapmap]
rs28393630	1.00[AMR][1000 genomes]
rs28408353	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28450014	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6947978	1.00[YRI][hapmap]
rs6949079	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6952265	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6954982	1.00[ASW][hapmap];0.91[MKK][hapmap];1.00[YRI][hapmap]
rs6980172	0.87[YRI][hapmap]
rs73218218	0.94[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017029	chr7:121958574-122338623	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv3418472	chr7:122180941-122182964	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:122182600-122183200	Enhancers	Fetal Lung	lung

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