Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:122163053..122164958-chr7:122167559..122169513,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10229609	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs10235626	0.87[YRI][hapmap]
rs10238269	0.87[YRI][hapmap]
rs10246699	1.00[AMR][1000 genomes]
rs10253515	1.00[YRI][hapmap];0.82[AFR][1000 genomes]
rs10256514	1.00[AMR][1000 genomes]
rs10258166	0.87[YRI][hapmap]
rs10258309	0.87[YRI][hapmap]
rs10258422	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10259052	1.00[ASW][hapmap];0.91[MKK][hapmap];1.00[YRI][hapmap]
rs10269952	0.82[AFR][1000 genomes]
rs10271472	0.87[YRI][hapmap]
rs10275211	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10281006	1.00[YRI][hapmap]
rs10441358	1.00[YRI][hapmap]
rs11974367	1.00[YRI][hapmap]
rs17380636	0.87[YRI][hapmap]
rs28408353	0.82[AFR][1000 genomes]
rs6947978	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs6949079	1.00[YRI][hapmap]
rs6952265	1.00[YRI][hapmap]
rs6960107	0.93[AFR][1000 genomes]
rs6972775	1.00[AMR][1000 genomes]
rs6980172	0.87[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017029	chr7:121958574-122338623	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:122155800-122171000	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr7:122160400-122170800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr7:122163800-122164000	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr7:122163800-122164000	Enhancers	iPS-20b Cell Line	embryonic stem cell

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