Variant report

Variant	rs1030855
Chromosome Location	chr1:217123616-217123617
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs1030845	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1030854	0.87[CHB][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10492959	0.86[CHB][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10863284	0.81[CHB][hapmap];0.82[YRI][hapmap];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11117734	0.81[CHB][hapmap];0.96[YRI][hapmap];0.89[AFR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11117736	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11117739	0.93[EUR][1000 genomes]
rs11117740	0.93[EUR][1000 genomes]
rs11117741	0.92[EUR][1000 genomes]
rs1960901	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2377265	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2576197	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2576199	0.87[CHB][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2576200	0.87[EUR][1000 genomes]
rs2576208	0.85[EUR][1000 genomes]
rs2576226	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2576227	0.93[EUR][1000 genomes]
rs2576228	0.93[EUR][1000 genomes]
rs2576229	0.93[EUR][1000 genomes]
rs2576230	0.93[EUR][1000 genomes]
rs2789572	0.85[EUR][1000 genomes]
rs2818754	0.80[ASN][1000 genomes]
rs2818755	0.87[EUR][1000 genomes]
rs2818757	0.82[CHB][hapmap];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2818758	0.86[CHB][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2818789	0.93[EUR][1000 genomes]
rs2818790	0.93[EUR][1000 genomes]
rs2818791	0.92[EUR][1000 genomes]
rs2818792	0.93[EUR][1000 genomes]
rs2818793	0.93[EUR][1000 genomes]
rs2818794	0.93[EUR][1000 genomes]
rs2818795	0.93[EUR][1000 genomes]
rs2818797	0.93[EUR][1000 genomes]
rs2818798	0.85[EUR][1000 genomes]
rs2818799	0.93[EUR][1000 genomes]
rs2818800	0.93[EUR][1000 genomes]
rs2818801	0.86[EUR][1000 genomes]
rs3098286	0.93[EUR][1000 genomes]
rs3098287	0.93[EUR][1000 genomes]
rs3122530	0.89[EUR][1000 genomes]
rs893127	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs994921	0.83[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:217111000-217125400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr1:217118800-217125400	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr1:217119600-217125400	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr1:217119600-217125400	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr1:217119800-217126000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr1:217120400-217126200	Weak transcription	H1 Cell Line	embryonic stem cell
7	chr1:217121200-217125400	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr1:217121400-217125600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr1:217122400-217146200	Weak transcription	Pancreas	Pancrea
10	chr1:217123200-217124600	Weak transcription	Fetal Heart	heart

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