Variant report

Variant	rs2818758
Chromosome Location	chr1:217122871-217122872
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 56 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:56)

rs_ID	r²[population]
rs1030845	0.88[CEU][hapmap];0.86[GIH][hapmap];0.95[JPT][hapmap];0.83[ASN][1000 genomes]
rs1030854	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1030855	0.86[CHB][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10492959	0.88[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10863284	0.86[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs11117734	0.82[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11117736	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11117739	0.84[EUR][1000 genomes]
rs11117740	0.83[CEU][hapmap];0.84[EUR][1000 genomes]
rs11117741	0.83[CEU][hapmap];0.84[EUR][1000 genomes]
rs12562202	0.85[JPT][hapmap]
rs1832523	0.88[CEU][hapmap]
rs1890551	0.88[CEU][hapmap];0.93[YRI][hapmap]
rs1890552	0.88[CEU][hapmap];1.00[YRI][hapmap]
rs1960901	0.88[CEU][hapmap];0.86[GIH][hapmap];0.95[JPT][hapmap];0.83[ASN][1000 genomes]
rs2377265	0.83[ASN][1000 genomes]
rs2576196	0.88[CEU][hapmap];0.80[GIH][hapmap]
rs2576197	0.94[CEU][hapmap];0.95[GIH][hapmap];0.83[LWK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2576199	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2576200	0.94[CEU][hapmap];0.88[GIH][hapmap];0.87[TSI][hapmap];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2576201	0.88[CEU][hapmap]
rs2576208	0.87[CEU][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2576226	0.94[CEU][hapmap];0.85[GIH][hapmap];0.86[EUR][1000 genomes]
rs2576227	0.83[CEU][hapmap];0.84[EUR][1000 genomes]
rs2576228	0.84[EUR][1000 genomes]
rs2576229	0.82[CEU][hapmap];0.84[EUR][1000 genomes]
rs2576230	0.83[CEU][hapmap];0.84[EUR][1000 genomes]
rs2576271	0.94[CEU][hapmap];0.86[YRI][hapmap];0.81[EUR][1000 genomes]
rs2789557	0.88[CEU][hapmap];0.80[GIH][hapmap]
rs2789558	0.88[CEU][hapmap];0.80[GIH][hapmap]
rs2789560	0.88[CEU][hapmap]
rs2789572	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2818754	0.94[CEU][hapmap];0.81[JPT][hapmap];0.86[YRI][hapmap];0.88[AFR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2818755	0.94[CEU][hapmap];0.81[JPT][hapmap];0.86[YRI][hapmap];0.90[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs2818757	0.94[CEU][hapmap];0.95[CHB][hapmap];0.85[JPT][hapmap];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2818768	0.88[CEU][hapmap]
rs2818769	0.88[CEU][hapmap]
rs2818772	0.83[CEU][hapmap]
rs2818789	0.83[CEU][hapmap];0.84[EUR][1000 genomes]
rs2818790	0.83[CEU][hapmap];0.84[EUR][1000 genomes]
rs2818791	0.83[CEU][hapmap];0.84[EUR][1000 genomes]
rs2818792	0.84[EUR][1000 genomes]
rs2818793	0.83[CEU][hapmap];0.84[EUR][1000 genomes]
rs2818794	0.84[EUR][1000 genomes]
rs2818795	0.83[CEU][hapmap];0.84[EUR][1000 genomes]
rs2818797	0.82[CEU][hapmap];0.84[EUR][1000 genomes]
rs2818798	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2818799	0.81[CEU][hapmap];0.82[GIH][hapmap];0.84[EUR][1000 genomes]
rs2818800	0.84[EUR][1000 genomes]
rs2818801	0.94[CEU][hapmap];0.85[GIH][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.92[EUR][1000 genomes]
rs3000609	0.88[CEU][hapmap]
rs3098286	0.82[CEU][hapmap];0.84[EUR][1000 genomes]
rs3098287	0.83[CEU][hapmap];0.84[EUR][1000 genomes]
rs3122530	0.94[CEU][hapmap];0.95[GIH][hapmap];0.83[LWK][hapmap];1.00[TSI][hapmap];0.86[YRI][hapmap];0.99[EUR][1000 genomes]
rs893127	0.88[CEU][hapmap];0.95[JPT][hapmap];0.83[ASN][1000 genomes]
rs994921	0.83[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:217111000-217125400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr1:217118800-217125400	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr1:217119600-217125400	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr1:217119600-217125400	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr1:217119800-217126000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr1:217120400-217126200	Weak transcription	H1 Cell Line	embryonic stem cell
7	chr1:217121200-217125400	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr1:217121400-217125600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
9	chr1:217122400-217146200	Weak transcription	Pancreas	Pancrea
10	chr1:217122800-217123000	Enhancers	Fetal Heart	heart

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