The 2.0 version of rSNPBase

Variant report

Variant rs10456330
Chromosome Location chr6:26436692-26436693
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:26422200-26439800 Weak transcription Placenta Amnion Placenta Amnion
2 chr6:26422400-26439400 Weak transcription Primary T cells from cord blood blood
3 chr6:26422400-26439400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr6:26422400-26439600 Weak transcription Thymus Thymus
5 chr6:26422600-26439400 Weak transcription HMEC breast
6 chr6:26422600-26439600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr6:26422600-26439800 Weak transcription Primary B cells from cord blood blood
8 chr6:26422600-26440000 Weak transcription Psoas Muscle Psoas
9 chr6:26423200-26440000 Weak transcription Colonic Mucosa Colon
10 chr6:26423600-26439400 Weak transcription Primary T cells fromperipheralblood blood
11 chr6:26423600-26440400 Weak transcription Right Ventricle heart
12 chr6:26423800-26439600 Weak transcription Colon Smooth Muscle Colon
13 chr6:26423800-26439800 Weak transcription Hela-S3 cervix
14 chr6:26425800-26439600 Weak transcription Small Intestine intestine
15 chr6:26429200-26439800 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr6:26430000-26439400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr6:26430000-26439400 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr6:26430000-26439800 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr6:26430200-26439400 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr6:26431800-26438600 Weak transcription NHEK skin
21 chr6:26432000-26439400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr6:26432000-26439600 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr6:26432000-26440000 Weak transcription A549 lung
24 chr6:26432200-26440200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr6:26432400-26439200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr6:26432400-26439400 Weak transcription Duodenum Mucosa Duodenum
27 chr6:26432400-26439400 Weak transcription Rectal Smooth Muscle rectum
28 chr6:26432400-26439600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr6:26432400-26439800 Weak transcription Stomach Smooth Muscle stomach
30 chr6:26432400-26440000 Weak transcription Fetal Intestine Large intestine
31 chr6:26432400-26440000 Weak transcription Left Ventricle heart
32 chr6:26432400-26440000 Weak transcription HSMM muscle
33 chr6:26432400-26440200 Weak transcription Ovary ovary
34 chr6:26432400-26440800 Weak transcription Gastric stomach
35 chr6:26432400-26440800 Weak transcription Lung lung
36 chr6:26432400-26440800 Weak transcription Pancreas Pancrea
37 chr6:26432600-26439800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr6:26432600-26439800 Weak transcription Fetal Kidney kidney
39 chr6:26432600-26440400 Weak transcription Fetal Muscle Trunk muscle
40 chr6:26433400-26439600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr6:26433400-26439800 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr6:26433400-26440000 Weak transcription Muscle Satellite Cultured Cells --
43 chr6:26433400-26440000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr6:26433400-26440000 Weak transcription HSMMtube muscle
45 chr6:26433400-26440000 Weak transcription NHLF lung
46 chr6:26433600-26440000 Weak transcription NHDF-Ad bronchial
47 chr6:26433800-26439800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr6:26434600-26439600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr6:26434800-26439600 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr6:26434800-26440200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015