Variant report

Variant	rs10767964
Chromosome Location	chr11:32783743-32783744
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 98 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:95)

rs_ID	r²[population]
rs1038554	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs10734413	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs10734414	0.94[ASN][1000 genomes]
rs10742287	0.80[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs10742288	0.94[ASN][1000 genomes]
rs10767954	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs10767955	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs10767956	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs10767961	0.94[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10767965	0.94[CHB][hapmap]
rs10767967	0.94[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs10835958	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs10835959	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs10835967	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10835968	0.94[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10835971	0.94[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10835972	0.94[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs10835974	0.94[CHB][hapmap]
rs10835975	0.94[ASN][1000 genomes]
rs10835976	0.94[ASN][1000 genomes]
rs11031940	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs11031947	0.94[CHB][hapmap]
rs11031969	1.00[CHB][hapmap]
rs11031971	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11031990	0.84[ASN][1000 genomes]
rs11031991	0.93[ASN][1000 genomes]
rs11529903	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12224741	0.94[CHB][hapmap]
rs1352176	0.89[CHB][hapmap]
rs1396996	0.94[CHB][hapmap]
rs1486580	0.89[CHB][hapmap]
rs1486581	0.94[CHB][hapmap]
rs1486582	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1509888	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1509890	0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1509891	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1543420	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs169326	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs172100	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs172101	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs201846	0.89[CHB][hapmap]
rs201851	0.94[CHB][hapmap]
rs201854	0.88[CHB][hapmap]
rs201869	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs201872	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs201873	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs201875	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs201877	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs201879	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs201880	0.94[CHB][hapmap]
rs201881	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs201892	0.94[CHB][hapmap]
rs201897	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs201901	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs201903	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs201904	0.94[CHB][hapmap]
rs201905	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs201906	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs2089693	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2419761	0.85[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2419766	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs2748353	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs4756149	0.94[CHB][hapmap]
rs4756150	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs4756179	0.94[CHB][hapmap]
rs4756183	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs4756244	0.94[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs4756245	0.94[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs511667	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs527728	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs552512	0.94[CHB][hapmap]
rs6484587	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs6484595	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6484596	0.97[ASN][1000 genomes]
rs6484597	0.94[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7102857	0.94[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs7103408	0.94[ASN][1000 genomes]
rs7105305	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs7109509	0.94[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs7113697	0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs7129723	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs738508	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs7932536	0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7933967	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs7936690	0.94[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7938290	0.94[CHB][hapmap]
rs7944621	0.85[CHB][hapmap];0.84[JPT][hapmap]
rs910551	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs926735	0.94[CHB][hapmap]
rs960389	0.94[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs966028	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs9666408	0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs9787751	0.94[CHB][hapmap]
rs9787914	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs9943472	0.94[CHB][hapmap];1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832109	chr11:32661314-32830549	Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv2758262	chr11:32714643-33049940	Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
3	esv2759815	chr11:32714643-33049940	Flanking Active TSS Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32777800-32790200	Weak transcription	Liver	Liver

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