The 2.0 version of rSNPBase

Variant report

Variant rs10786006
Chromosome Location chr10:93377309-93377310
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:93368000-93388600 Weak transcription Brain Angular Gyrus brain
2 chr10:93369000-93387600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr10:93369400-93378600 Weak transcription Fetal Intestine Small intestine
4 chr10:93369400-93379200 Weak transcription Liver Liver
5 chr10:93369600-93387800 Weak transcription Fetal Brain Male brain
6 chr10:93371400-93381400 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr10:93371400-93383600 Weak transcription Ovary ovary
8 chr10:93371400-93383600 Weak transcription Right Ventricle heart
9 chr10:93371400-93386800 Weak transcription Pancreas Pancrea
10 chr10:93373600-93379200 Weak transcription Fetal Lung lung
11 chr10:93373800-93380800 Weak transcription Right Atrium heart
12 chr10:93374000-93381400 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr10:93374000-93384800 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr10:93374000-93386200 Weak transcription Left Ventricle heart
15 chr10:93374000-93387000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr10:93374200-93383000 Weak transcription Fetal Heart heart
17 chr10:93374200-93384000 Weak transcription Stomach Smooth Muscle stomach
18 chr10:93375200-93377400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr10:93375400-93377600 Enhancers NHEK skin
20 chr10:93375400-93377800 Enhancers NHDF-Ad bronchial
21 chr10:93375600-93377600 Enhancers NH-A brain
22 chr10:93376000-93377400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr10:93376000-93377600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
24 chr10:93376000-93377600 Enhancers Osteobl bone
25 chr10:93376200-93377600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr10:93376200-93379000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr10:93376800-93377400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr10:93376800-93377400 Enhancers Skeletal Muscle Female skeletal muscle
29 chr10:93376800-93377400 Enhancers HMEC breast
30 chr10:93376800-93377400 Enhancers HUVEC blood vessel
31 chr10:93377000-93377400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr10:93377000-93377400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr10:93377000-93377400 Flanking Active TSS Muscle Satellite Cultured Cells --
34 chr10:93377000-93377400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
35 chr10:93377000-93377400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr10:93377000-93377400 Enhancers Fetal Stomach stomach
37 chr10:93377000-93377400 Enhancers Psoas Muscle Psoas
38 chr10:93377000-93377400 Enhancers Stomach Mucosa stomach
39 chr10:93377000-93377400 Flanking Active TSS A549 lung
40 chr10:93377000-93377400 Flanking Active TSS Hela-S3 cervix
41 chr10:93377000-93377400 Enhancers HSMM muscle
42 chr10:93377000-93377400 Flanking Active TSS K562 blood
43 chr10:93377000-93377400 Flanking Active TSS NHLF lung
44 chr10:93377000-93377600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr10:93377000-93377600 Enhancers HSMMtube muscle
46 chr10:93377200-93377400 Genic enhancers Esophagus oesophagus
47 chr10:93377200-93377400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
48 chr10:93377200-93379400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015