Variant report

Variant	rs10786266
Chromosome Location	chr10:97926690-97926691
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:97910420..97912683-chr10:97924000..97927291,3	K562	blood:
2	chr10:97920196..97922493-chr10:97925714..97928075,3	K562	blood:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10748663	0.86[ASN][1000 genomes]
rs10748664	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs10786264	0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10786270	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10882726	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11188592	0.82[CEU][hapmap]
rs11188600	0.82[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.85[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs11188654	0.85[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs1172942	0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1172944	0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1172945	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1172949	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs1172962	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12255700	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs12414619	0.82[CEU][hapmap]
rs1902702	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2125061	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2446024	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2484914	0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2484915	0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs2861304	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3762091	1.00[CEU][hapmap]
rs4918985	0.82[CEU][hapmap]
rs7087644	0.82[CEU][hapmap]
rs7087926	0.99[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97891000-97927000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr10:97912400-97927800	Weak transcription	Fetal Brain Male	brain
3	chr10:97917400-97928000	Weak transcription	Placenta Amnion	Placenta Amnion
4	chr10:97918200-97928000	Weak transcription	Thymus	Thymus
5	chr10:97918400-97930000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr10:97918800-97928000	Weak transcription	A549	lung
7	chr10:97918800-97929400	Weak transcription	HepG2	liver
8	chr10:97919400-97927400	Weak transcription	HSMMtube	muscle
9	chr10:97919600-97926800	Weak transcription	Fetal Thymus	thymus
10	chr10:97919600-97927400	Weak transcription	Cortex derived primary cultured neurospheres	brain
11	chr10:97919600-97930000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr10:97919800-97927200	Weak transcription	Fetal Muscle Trunk	muscle
13	chr10:97921000-97930200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr10:97921800-97927600	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr10:97922000-97927800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
16	chr10:97922200-97927600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
17	chr10:97923000-97927000	Weak transcription	HUES64 Cell Line	embryonic stem cell
18	chr10:97923200-97927400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr10:97924200-97927800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr10:97925400-97926800	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr10:97925600-97926800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr10:97926400-97926800	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain

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