Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1074086	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10790452	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10790459	0.80[AMR][1000 genomes]
rs1111949	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1893841	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1944678	0.82[AMR][1000 genomes]
rs1944682	0.82[AMR][1000 genomes]
rs1944683	0.82[AMR][1000 genomes]
rs1944696	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2156664	0.82[AMR][1000 genomes]
rs4450181	0.80[CEU][hapmap]
rs4936649	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4936650	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs564080	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs616412	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs633277	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6589894	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6589895	0.80[AMR][1000 genomes]
rs7108855	0.82[AMR][1000 genomes]
rs7121084	0.80[AMR][1000 genomes]
rs7937934	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs949078	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898428	chr11:121568262-121671976	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv975988	chr11:121574786-121593725	Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Weak transcription ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a
3	nsv832287	chr11:121575379-121722735	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121587200-121592800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr11:121587400-121592800	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr11:121590400-121591000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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