Variant report

Variant	rs10793446
Chromosome Location	chr10:44087671-44087672
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10793447	0.89[CHB][hapmap];0.81[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs10793448	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10793449	0.89[CHB][hapmap];0.81[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];0.88[MEX][hapmap];0.87[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs10793450	0.82[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs10793451	0.83[CEU][hapmap];0.94[JPT][hapmap]
rs10899837	0.81[ASN][1000 genomes]
rs10899838	0.89[CHB][hapmap];0.89[JPT][hapmap]
rs11238592	0.94[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs1974282	0.88[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.87[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs2039723	0.89[CHB][hapmap];0.81[CHD][hapmap];0.89[JPT][hapmap]
rs2039724	0.86[CEU][hapmap];0.88[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2066045	0.86[ASN][1000 genomes]
rs2066046	0.88[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.87[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs2393936	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2393946	0.84[ASN][1000 genomes]
rs3123680	0.94[JPT][hapmap]
rs4948749	0.81[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs6593362	0.91[CEU][hapmap];0.82[CHB][hapmap];0.84[CHD][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.81[ASN][1000 genomes]
rs7342073	0.94[JPT][hapmap]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs10793446	ZNF239	cis	lymphoblastoid	seeQTL

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44086600-44090600	Weak transcription	Gastric	stomach

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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