Variant report

Variant rs10853854
Chromosome Location chr19:53232128-53232129
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53210400-53236600 Weak transcription Psoas Muscle Psoas
2 chr19:53210600-53237200 Weak transcription NHDF-Ad bronchial
3 chr19:53214800-53237200 Weak transcription Stomach Mucosa stomach
4 chr19:53215800-53237000 Weak transcription Brain Angular Gyrus brain
5 chr19:53216800-53236600 Weak transcription Brain Cingulate Gyrus brain
6 chr19:53221000-53237400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr19:53223400-53232200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
8 chr19:53224000-53232400 Strong transcription Primary T helper cells fromperipheralblood blood
9 chr19:53225000-53236800 Weak transcription Brain Hippocampus Middle brain
10 chr19:53225200-53232400 Strong transcription Primary T cells fromperipheralblood blood
11 chr19:53225200-53236600 Weak transcription Brain Inferior Temporal Lobe brain
12 chr19:53225200-53237000 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr19:53225200-53237200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr19:53225200-53237200 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr19:53225400-53233400 Strong transcription Primary B cells from peripheral blood blood
16 chr19:53225400-53236600 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr19:53225400-53237200 Weak transcription H9 Cell Line embryonic stem cell
18 chr19:53226000-53232800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
19 chr19:53226200-53232200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr19:53226200-53237200 Weak transcription HUVEC blood vessel
21 chr19:53226200-53237200 Weak transcription Osteobl bone
22 chr19:53226400-53237200 Weak transcription HMEC breast
23 chr19:53226600-53232200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr19:53226600-53233200 Strong transcription Primary T helper naive cells fromperipheralblood blood
25 chr19:53226800-53232200 Strong transcription Rectal Mucosa Donor 31 rectum
26 chr19:53226800-53232400 Strong transcription Brain Anterior Caudate brain
27 chr19:53226800-53235200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr19:53227000-53232600 Strong transcription Dnd41 blood
29 chr19:53227000-53232800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
30 chr19:53227000-53232800 Strong transcription Duodenum Mucosa Duodenum
31 chr19:53227000-53232800 Strong transcription Monocytes-CD14+_RO01746 blood
32 chr19:53228000-53236400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr19:53228200-53232200 Weak transcription Fetal Kidney kidney
34 chr19:53228200-53232400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr19:53228400-53232600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr19:53228400-53237400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr19:53228600-53232200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr19:53228800-53232600 ZNF genes & repeats GM12878-XiMat blood
39 chr19:53228800-53236600 Weak transcription Fetal Heart heart
40 chr19:53229000-53232200 Strong transcription Primary T regulatory cells fromperipheralblood blood
41 chr19:53229000-53232400 Strong transcription Rectal Mucosa Donor 29 rectum
42 chr19:53229000-53232400 Weak transcription HepG2 liver
43 chr19:53229000-53236800 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr19:53229000-53237000 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr19:53229000-53237200 Weak transcription NH-A brain
46 chr19:53229200-53232400 Strong transcription Fetal Stomach stomach
47 chr19:53229400-53233200 Weak transcription H1 Cell Line embryonic stem cell
48 chr19:53229400-53236600 Weak transcription Stomach Smooth Muscle stomach
49 chr19:53229400-53237200 Weak transcription Aorta Aorta
50 chr19:53229600-53236600 Weak transcription Esophagus oesophagus

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