The 2.0 version of rSNPBase

Variant report

Variant rs10912009
Chromosome Location chr1:172566234-172566235
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172519400-172571600 Weak transcription Brain Angular Gyrus brain
2 chr1:172535600-172569200 Weak transcription Gastric stomach
3 chr1:172540200-172581000 Weak transcription Colonic Mucosa Colon
4 chr1:172557400-172581200 Weak transcription Fetal Heart heart
5 chr1:172557600-172574600 Weak transcription Stomach Mucosa stomach
6 chr1:172559000-172583400 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr1:172559400-172571600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr1:172559800-172573400 Weak transcription Fetal Brain Male brain
9 chr1:172560000-172566800 Weak transcription NHLF lung
10 chr1:172560000-172569600 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr1:172560000-172578400 Weak transcription HSMMtube muscle
12 chr1:172560000-172580600 Weak transcription Small Intestine intestine
13 chr1:172560000-172581200 Weak transcription Psoas Muscle Psoas
14 chr1:172560000-172582400 Weak transcription Brain Substantia Nigra brain
15 chr1:172560200-172566600 Weak transcription K562 blood
16 chr1:172560200-172567200 Weak transcription HepG2 liver
17 chr1:172560200-172569200 Weak transcription Osteobl bone
18 chr1:172560200-172569400 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr1:172560200-172574200 Weak transcription HUVEC blood vessel
20 chr1:172560200-172581800 Weak transcription Hela-S3 cervix
21 chr1:172560400-172566400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:172560400-172566400 Weak transcription Placenta Amnion Placenta Amnion
23 chr1:172560400-172566600 Weak transcription HSMM muscle
24 chr1:172560400-172566600 Weak transcription NH-A brain
25 chr1:172560400-172566600 Weak transcription NHDF-Ad bronchial
26 chr1:172560400-172568600 Weak transcription NHEK skin
27 chr1:172560400-172569200 Weak transcription GM12878-XiMat blood
28 chr1:172560400-172569600 Weak transcription Muscle Satellite Cultured Cells --
29 chr1:172560400-172569600 Weak transcription HMEC breast
30 chr1:172560400-172571400 Weak transcription Brain Cingulate Gyrus brain
31 chr1:172560400-172572800 Weak transcription Brain Inferior Temporal Lobe brain
32 chr1:172560600-172569200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr1:172563600-172566600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:172563600-172567000 Strong transcription Fetal Muscle Leg muscle
35 chr1:172563600-172567600 Strong transcription Primary T cells from cord blood blood
36 chr1:172563600-172568800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:172563600-172574400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr1:172563600-172574800 Strong transcription Primary B cells from peripheral blood blood
39 chr1:172563800-172566400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
40 chr1:172563800-172567000 Strong transcription Fetal Adrenal Gland Adrenal Gland
41 chr1:172563800-172567800 Strong transcription Rectal Mucosa Donor 29 rectum
42 chr1:172563800-172568000 Strong transcription Liver Liver
43 chr1:172563800-172581200 Strong transcription Primary B cells from cord blood blood
44 chr1:172563800-172582000 Strong transcription Monocytes-CD14+_RO01746 blood
45 chr1:172564000-172566600 Weak transcription Primary T regulatory cells fromperipheralblood blood
46 chr1:172564400-172567400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr1:172564400-172567800 Strong transcription Duodenum Smooth Muscle Duodenum
48 chr1:172564400-172581000 Strong transcription Primary neutrophils fromperipheralblood blood
49 chr1:172564400-172582000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
50 chr1:172564600-172566800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015