Variant report

No.	Distal block	Cell Line	Cell type
1	chr9:110248109..110252233-chr9:110878259..110882011,4	MCF-7	breast:
2	chr9:110878353..110880845-chr9:110882661..110885417,2	MCF-7	breast:
3	chr9:110248941..110251863-chr9:110878808..110881491,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000136826	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10118814	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10120623	0.80[EUR][1000 genomes]
rs10283867	0.80[EUR][1000 genomes]
rs10816630	0.80[EUR][1000 genomes]
rs10816631	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10979213	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12353211	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12708283	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1434849	0.85[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1999454	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2043486	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7042864	0.80[EUR][1000 genomes]
rs7045748	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7046495	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7046752	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7861571	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7873138	0.99[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7874033	0.81[EUR][1000 genomes]
rs7874300	0.81[EUR][1000 genomes]
rs7874302	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3391214	chr9:110876981-110879229	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:110863200-110881600	Weak transcription	Gastric	stomach
2	chr9:110867400-110880200	Weak transcription	Esophagus	oesophagus
3	chr9:110867600-110881600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr9:110868600-110899800	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr9:110876800-110883800	Weak transcription	K562	blood
6	chr9:110878200-110883000	Enhancers	Stomach Mucosa	stomach

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