Variant report

Variant	rs12353211
Chromosome Location	chr9:110874814-110874815
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:110871096..110873067-chr9:110873240..110875254,2	K562	blood:

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10118814	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10120623	0.80[CEU][hapmap];0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10283867	0.83[EUR][1000 genomes]
rs10816630	0.82[CEU][hapmap];0.83[EUR][1000 genomes]
rs10816631	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10979211	0.93[ASW][hapmap];0.82[CEU][hapmap];0.83[EUR][1000 genomes]
rs10979213	1.00[CHB][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10979214	0.83[EUR][1000 genomes]
rs10979218	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10979219	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12708283	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1434849	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1999454	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2043486	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7042864	0.98[AFR][1000 genomes];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7045748	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7046495	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7046752	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7856975	0.82[CEU][hapmap];0.82[EUR][1000 genomes]
rs7861571	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7873138	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7874033	0.99[AFR][1000 genomes];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7874300	0.99[AFR][1000 genomes];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7874302	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:110863200-110881600	Weak transcription	Gastric	stomach
2	chr9:110867400-110880200	Weak transcription	Esophagus	oesophagus
3	chr9:110867600-110881600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr9:110868600-110899800	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr9:110871600-110875400	Weak transcription	Osteobl	bone
6	chr9:110871800-110876000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr9:110872600-110875000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr9:110872600-110878200	Weak transcription	Stomach Mucosa	stomach
9	chr9:110873000-110875200	Weak transcription	K562	blood

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