Variant report

Variant	rs7046752
Chromosome Location	chr9:110876562-110876563
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10118814	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10120623	0.83[EUR][1000 genomes]
rs10283867	0.88[YRI][hapmap];0.83[EUR][1000 genomes]
rs10816630	0.82[CEU][hapmap];0.83[EUR][1000 genomes]
rs10816631	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10979211	0.82[CEU][hapmap];0.83[EUR][1000 genomes]
rs10979213	1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10979214	0.83[EUR][1000 genomes]
rs10979218	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10979219	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12353211	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12708283	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1434849	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1999454	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2043486	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7042864	0.83[EUR][1000 genomes]
rs7045748	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7046495	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7856975	0.82[CEU][hapmap];0.82[EUR][1000 genomes]
rs7861571	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7873138	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7874033	0.84[EUR][1000 genomes]
rs7874300	0.84[EUR][1000 genomes]
rs7874302	0.84[EUR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:110863200-110881600	Weak transcription	Gastric	stomach
2	chr9:110867400-110880200	Weak transcription	Esophagus	oesophagus
3	chr9:110867600-110881600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr9:110868600-110899800	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr9:110872600-110878200	Weak transcription	Stomach Mucosa	stomach
6	chr9:110875200-110876800	Enhancers	K562	blood
7	chr9:110875400-110876600	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr9:110875400-110876800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr9:110875400-110876800	Enhancers	Monocytes-CD14+_RO01746	blood
10	chr9:110875800-110876600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr9:110875800-110876800	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr9:110876000-110876600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

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