Variant report

Variant	rs11013412
Chromosome Location	chr10:23641464-23641465
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10741026	0.82[ASN][1000 genomes]
rs10764397	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10764398	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10828419	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10828421	0.86[AMR][1000 genomes]
rs10828422	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10828423	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10828430	0.87[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs10828431	0.82[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11013356	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11013364	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11013397	0.82[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11013404	1.00[CEU][hapmap];0.80[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs12246990	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs3891382	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4144623	0.86[AMR][1000 genomes]
rs4258280	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4359107	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4382803	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4433485	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4626975	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4747455	0.84[AMR][1000 genomes]
rs4747466	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4748844	0.82[CEU][hapmap]
rs4748850	1.00[CEU][hapmap];0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4748861	0.85[CHB][hapmap]
rs4748866	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4748877	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61629455	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7907909	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7919530	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23635200-23643800	Weak transcription	Fetal Kidney	kidney
2	chr10:23639600-23644000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr10:23640000-23641600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr10:23640000-23641800	Enhancers	Hela-S3	cervix
5	chr10:23640400-23641600	Enhancers	Muscle Satellite Cultured Cells	--
6	chr10:23640400-23641800	Enhancers	HMEC	breast
7	chr10:23640400-23641800	Enhancers	Osteobl	bone
8	chr10:23640600-23641800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr10:23640600-23641800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr10:23640800-23641600	Enhancers	NHLF	lung
11	chr10:23641400-23641800	Enhancers	NHEK	skin
12	chr10:23641400-23643200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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