Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs11014036	0.91[EUR][1000 genomes]
rs11812630	0.91[EUR][1000 genomes]
rs11813051	0.85[GIH][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap]
rs11815316	0.86[CHB][hapmap];1.00[GIH][hapmap];0.86[JPT][hapmap];0.91[EUR][1000 genomes]
rs12258178	0.93[GIH][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.91[EUR][1000 genomes]
rs12262789	0.85[AMR][1000 genomes]
rs12772024	0.86[CHB][hapmap];0.86[JPT][hapmap];0.91[EUR][1000 genomes]
rs16917257	0.93[GIH][hapmap];0.86[JPT][hapmap];1.00[MEX][hapmap];0.91[EUR][1000 genomes]
rs16917288	0.86[CHB][hapmap];0.86[JPT][hapmap];0.91[EUR][1000 genomes]
rs16917309	0.86[CHB][hapmap];0.81[GIH][hapmap];0.86[JPT][hapmap];1.00[EUR][1000 genomes]
rs16917315	0.85[CHB][hapmap];0.86[JPT][hapmap];1.00[EUR][1000 genomes]
rs16917320	0.86[CHB][hapmap];0.86[JPT][hapmap];1.00[EUR][1000 genomes]
rs16917323	0.86[CHB][hapmap];0.86[JPT][hapmap];1.00[EUR][1000 genomes]
rs16917341	0.81[EUR][1000 genomes]
rs16917412	1.00[MEX][hapmap];0.81[EUR][1000 genomes]
rs1813353	0.86[JPT][hapmap]
rs4748473	0.81[EUR][1000 genomes]
rs55988124	0.91[EUR][1000 genomes]
rs57285503	0.91[EUR][1000 genomes]
rs59167174	0.91[EUR][1000 genomes]
rs59779524	0.91[EUR][1000 genomes]
rs61368411	0.91[EUR][1000 genomes]
rs7075571	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs74117987	0.91[EUR][1000 genomes]
rs74117988	0.91[EUR][1000 genomes]
rs74117989	0.91[EUR][1000 genomes]
rs912985	0.86[CHB][hapmap];0.86[JPT][hapmap];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv550042	chr10:18683267-18994583	ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	nsv1053675	chr10:18703895-18722912	Enhancers Weak transcription Flanking Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18703600-18732000	Weak transcription	Pancreas	Pancrea
2	chr10:18713400-18718200	Weak transcription	Right Ventricle	heart
3	chr10:18713400-18721400	Weak transcription	Left Ventricle	heart
4	chr10:18713400-18727200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr10:18714600-18721000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr10:18715200-18718000	Weak transcription	Fetal Heart	heart

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