Variant report

Variant	rs1105263
Chromosome Location	chr3:43445129-43445130
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:43435850..43438260-chr3:43444953..43446705,3	K562	blood:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10510734	1.00[EUR][1000 genomes]
rs17075523	1.00[EUR][1000 genomes]
rs17075612	1.00[ASW][hapmap];1.00[CEU][hapmap];0.83[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.80[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs17075726	1.00[CEU][hapmap]
rs17075840	1.00[CEU][hapmap]
rs1848069	0.92[ASW][hapmap];1.00[CEU][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.88[YRI][hapmap];1.00[EUR][1000 genomes]
rs2068969	1.00[CEU][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs60173579	1.00[EUR][1000 genomes]
rs60410086	1.00[EUR][1000 genomes]
rs61676031	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6441770	1.00[EUR][1000 genomes]
rs6763493	1.00[EUR][1000 genomes]
rs72862031	1.00[EUR][1000 genomes]
rs72862060	1.00[EUR][1000 genomes]
rs72863608	1.00[EUR][1000 genomes]
rs72863615	1.00[EUR][1000 genomes]
rs72863618	1.00[EUR][1000 genomes]
rs72863622	1.00[EUR][1000 genomes]
rs72863647	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72863656	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73831272	1.00[EUR][1000 genomes]
rs7613430	1.00[EUR][1000 genomes]
rs7623284	1.00[EUR][1000 genomes]

No data

Chromatin state (count:50 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:43421400-43454800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr3:43428800-43447600	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr3:43430000-43449400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr3:43430000-43460200	Weak transcription	Aorta	Aorta
5	chr3:43431800-43447000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr3:43432000-43445600	Weak transcription	K562	blood
7	chr3:43432000-43446600	Weak transcription	HSMM	muscle
8	chr3:43432000-43450800	Weak transcription	Esophagus	oesophagus
9	chr3:43432000-43453600	Weak transcription	Gastric	stomach
10	chr3:43432000-43460200	Weak transcription	Rectal Smooth Muscle	rectum
11	chr3:43432000-43477800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr3:43432200-43447000	Weak transcription	Small Intestine	intestine
13	chr3:43432200-43448000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr3:43432200-43453800	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr3:43432400-43447600	Weak transcription	Skeletal Muscle Male	skeletal muscle
16	chr3:43432400-43453800	Weak transcription	Primary T cells from cord blood	blood
17	chr3:43433200-43447600	Weak transcription	Lung	lung
18	chr3:43433400-43448600	Weak transcription	NHEK	skin
19	chr3:43433400-43458800	Weak transcription	Pancreas	Pancrea
20	chr3:43435800-43448800	Weak transcription	Primary neutrophils fromperipheralblood	blood
21	chr3:43436200-43446800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
22	chr3:43436400-43445400	Weak transcription	Psoas Muscle	Psoas
23	chr3:43436400-43450600	Weak transcription	Placenta	Placenta
24	chr3:43436400-43452200	Weak transcription	Cortex derived primary cultured neurospheres	brain
25	chr3:43436400-43475800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr3:43437200-43446400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
27	chr3:43439200-43445800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr3:43440800-43464400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr3:43441000-43447400	Weak transcription	HSMMtube	muscle
30	chr3:43441000-43453800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
31	chr3:43442000-43447600	Weak transcription	Right Atrium	heart
32	chr3:43442000-43450800	Weak transcription	Ovary	ovary
33	chr3:43442000-43455200	Weak transcription	Right Ventricle	heart
34	chr3:43442200-43447600	Weak transcription	Stomach Smooth Muscle	stomach
35	chr3:43442200-43455200	Weak transcription	Fetal Stomach	stomach
36	chr3:43442400-43447000	Weak transcription	Left Ventricle	heart
37	chr3:43442400-43447400	Weak transcription	Skeletal Muscle Female	skeletal muscle
38	chr3:43442400-43460200	Weak transcription	Fetal Muscle Leg	muscle
39	chr3:43442600-43447600	Weak transcription	HUVEC	blood vessel
40	chr3:43442600-43460200	Weak transcription	Adipose Nuclei	Adipose
41	chr3:43442800-43448600	Weak transcription	Fetal Intestine Small	intestine
42	chr3:43443000-43495600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
43	chr3:43443400-43446200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
44	chr3:43443400-43465800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr3:43443600-43446000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr3:43443600-43446200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chr3:43443600-43447400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
48	chr3:43444200-43447600	Weak transcription	Fetal Brain Female	brain
49	chr3:43444600-43446600	Weak transcription	Fetal Lung	lung
50	chr3:43445000-43447600	Weak transcription	Duodenum Mucosa	Duodenum

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