Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10510734	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1105263	1.00[EUR][1000 genomes]
rs17075523	1.00[EUR][1000 genomes]
rs17075612	1.00[EUR][1000 genomes]
rs1848069	1.00[EUR][1000 genomes]
rs60173579	1.00[EUR][1000 genomes]
rs60410086	1.00[EUR][1000 genomes]
rs61676031	1.00[EUR][1000 genomes]
rs6441770	1.00[EUR][1000 genomes]
rs6763493	1.00[EUR][1000 genomes]
rs72862031	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72863608	1.00[EUR][1000 genomes]
rs72863615	1.00[EUR][1000 genomes]
rs72863618	1.00[EUR][1000 genomes]
rs72863622	1.00[EUR][1000 genomes]
rs72863647	1.00[EUR][1000 genomes]
rs72863656	1.00[EUR][1000 genomes]
rs73831272	1.00[EUR][1000 genomes]
rs7613430	1.00[EUR][1000 genomes]
rs7623284	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834672	chr3:43132722-43306272	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:43272800-43277400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr3:43273200-43276200	Weak transcription	HUVEC	blood vessel
3	chr3:43273200-43277200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr3:43273400-43275200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr3:43273600-43276000	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr3:43273600-43276000	Weak transcription	NHLF	lung
7	chr3:43273600-43277200	Weak transcription	NHEK	skin
8	chr3:43273600-43277400	Weak transcription	HMEC	breast
9	chr3:43273600-43277800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr3:43274000-43276200	Enhancers	Fetal Thymus	thymus
11	chr3:43274400-43276200	Enhancers	Thymus	Thymus
12	chr3:43274600-43274800	Enhancers	HSMMtube	muscle
13	chr3:43274600-43275200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr3:43274600-43275400	Enhancers	Breast Myoepithelial Primary Cells	Breast
15	chr3:43274600-43275600	Enhancers	Fetal Muscle Leg	muscle

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