Variant report

Variant rs111405711
Chromosome Location chr19:53353881-53353882
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53338800-53355000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr19:53339000-53357600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr19:53339000-53357800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
4 chr19:53339000-53359200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
5 chr19:53340600-53355000 ZNF genes & repeats Duodenum Mucosa Duodenum
6 chr19:53340800-53355000 ZNF genes & repeats Primary hematopoietic stem cells blood
7 chr19:53340800-53355000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr19:53340800-53357400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
9 chr19:53340800-53357800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
10 chr19:53342200-53355000 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
11 chr19:53342200-53357600 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr19:53342400-53357800 ZNF genes & repeats Liver Liver
13 chr19:53343200-53359200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
14 chr19:53344000-53358000 ZNF genes & repeats Lung lung
15 chr19:53345400-53360200 Weak transcription Fetal Heart heart
16 chr19:53345400-53360200 Weak transcription Hela-S3 cervix
17 chr19:53345800-53360400 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr19:53346000-53355000 Strong transcription Brain Inferior Temporal Lobe brain
19 chr19:53346200-53355000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr19:53346200-53357800 Strong transcription HUES48 Cell Line embryonic stem cell
21 chr19:53346200-53357800 Strong transcription Fetal Stomach stomach
22 chr19:53346400-53355000 Strong transcription Fetal Muscle Trunk muscle
23 chr19:53346400-53357800 Strong transcription Fetal Muscle Leg muscle
24 chr19:53346400-53360400 Weak transcription Fetal Brain Male brain
25 chr19:53347200-53356400 Strong transcription Placenta Placenta
26 chr19:53347600-53357600 Strong transcription iPS-20b Cell Line embryonic stem cell
27 chr19:53347600-53360000 Weak transcription HMEC breast
28 chr19:53347800-53355000 Strong transcription Primary T helper naive cells from peripheral blood blood
29 chr19:53347800-53357600 Strong transcription Stomach Smooth Muscle stomach
30 chr19:53348000-53354800 Strong transcription Primary T killer memory cells from peripheral blood blood
31 chr19:53348000-53355600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
32 chr19:53348000-53359200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr19:53348000-53359200 Strong transcription HUES6 Cell Line embryonic stem cell
34 chr19:53348000-53360200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr19:53348200-53355000 Strong transcription Left Ventricle heart
36 chr19:53348200-53357600 Strong transcription Adipose Nuclei Adipose
37 chr19:53348200-53358200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr19:53348400-53355000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr19:53348400-53355000 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr19:53348600-53354400 Strong transcription Fetal Thymus thymus
41 chr19:53348600-53357600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr19:53348600-53358800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr19:53348600-53360200 Weak transcription Stomach Mucosa stomach
44 chr19:53349200-53356800 Weak transcription Fetal Kidney kidney
45 chr19:53349200-53360200 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr19:53349400-53354800 Strong transcription NHEK skin
47 chr19:53349600-53354400 Strong transcription Thymus Thymus
48 chr19:53349600-53357600 Strong transcription Fetal Adrenal Gland Adrenal Gland
49 chr19:53349800-53360000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr19:53349800-53360000 Weak transcription iPS-15b Cell Line embryonic stem cell

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