Variant report
| Variant | rs11154439 |
|---|---|
| Chromosome Location | chr6:128838117-128838118 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:128817200-128839800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr6:128817200-128839800 | Weak transcription | Aorta | Aorta |
| 3 | chr6:128825800-128840000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 4 | chr6:128829400-128839400 | Weak transcription | Colonic Mucosa | Colon |
| 5 | chr6:128829400-128839600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 6 | chr6:128830000-128839600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 7 | chr6:128831400-128840000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 8 | chr6:128831600-128839800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 9 | chr6:128832200-128839400 | Enhancers | Liver | Liver |
| 10 | chr6:128832600-128839600 | Weak transcription | Gastric | stomach |
| 11 | chr6:128832800-128838200 | Weak transcription | Right Atrium | heart |
| 12 | chr6:128832800-128839600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 13 | chr6:128832800-128839800 | Weak transcription | Right Ventricle | heart |
| 14 | chr6:128834200-128839000 | Enhancers | A549 | lung |
| 15 | chr6:128834800-128838800 | Enhancers | HSMM | muscle |
| 16 | chr6:128834800-128839000 | Enhancers | Stomach Mucosa | stomach |
| 17 | chr6:128835000-128840600 | Active TSS | Fetal Brain Female | brain |
| 18 | chr6:128835200-128839200 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 19 | chr6:128835800-128839600 | Enhancers | Fetal Lung | lung |
| 20 | chr6:128835800-128839800 | Weak transcription | Small Intestine | intestine |
| 21 | chr6:128836200-128838400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 22 | chr6:128836400-128838200 | Enhancers | HMEC | breast |
| 23 | chr6:128836400-128839600 | Enhancers | Rectal Smooth Muscle | rectum |
| 24 | chr6:128836600-128838400 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 25 | chr6:128836600-128838400 | Enhancers | Fetal Intestine Small | intestine |
| 26 | chr6:128836600-128838600 | Enhancers | Fetal Stomach | stomach |
| 27 | chr6:128836600-128839200 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 28 | chr6:128836600-128839400 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 29 | chr6:128836800-128838400 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 30 | chr6:128836800-128838400 | Enhancers | Fetal Thymus | thymus |
| 31 | chr6:128836800-128838600 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 32 | chr6:128836800-128838800 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 33 | chr6:128836800-128838800 | Enhancers | Ovary | ovary |
| 34 | chr6:128836800-128839400 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 35 | chr6:128837000-128838200 | Enhancers | Fetal Intestine Large | intestine |
| 36 | chr6:128837000-128840000 | Flanking Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 37 | chr6:128837200-128838400 | Enhancers | Left Ventricle | heart |
| 38 | chr6:128837200-128838400 | Enhancers | Pancreas | Pancrea |
| 39 | chr6:128837200-128838600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 40 | chr6:128837200-128839000 | Flanking Active TSS | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 41 | chr6:128837200-128839000 | Flanking Active TSS | NH-A | brain |
| 42 | chr6:128837200-128839800 | Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 43 | chr6:128837200-128842800 | Active TSS | Brain Inferior Temporal Lobe | brain |
| 44 | chr6:128837400-128838200 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 45 | chr6:128837400-128838200 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 46 | chr6:128837400-128838600 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 47 | chr6:128837400-128838800 | Flanking Active TSS | Muscle Satellite Cultured Cells | -- |
| 48 | chr6:128837400-128838800 | Weak transcription | Hela-S3 | cervix |
| 49 | chr6:128837400-128839000 | Flanking Active TSS | HepG2 | liver |
| 50 | chr6:128837400-128839000 | Flanking Active TSS | NHEK | skin |
