Variant report
| Variant | rs17364020 |
|---|---|
| Chromosome Location | chr6:128831240-128831241 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:128815200-128833800 | Enhancers | Fetal Intestine Large | intestine |
| 2 | chr6:128817200-128839800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 3 | chr6:128817200-128839800 | Weak transcription | Aorta | Aorta |
| 4 | chr6:128820600-128833800 | Enhancers | Fetal Intestine Small | intestine |
| 5 | chr6:128821600-128836800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 6 | chr6:128823400-128832800 | Enhancers | Stomach Mucosa | stomach |
| 7 | chr6:128825800-128832400 | Weak transcription | Fetal Kidney | kidney |
| 8 | chr6:128825800-128840000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 9 | chr6:128827600-128831400 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 10 | chr6:128828400-128831600 | Enhancers | HSMMtube | muscle |
| 11 | chr6:128828600-128831400 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 12 | chr6:128828600-128831400 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 13 | chr6:128828600-128831600 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 14 | chr6:128828600-128831600 | Enhancers | HSMM | muscle |
| 15 | chr6:128828600-128832400 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 16 | chr6:128828600-128832800 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 17 | chr6:128828600-128833800 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 18 | chr6:128828600-128834000 | Enhancers | NH-A | brain |
| 19 | chr6:128829000-128832400 | Weak transcription | Gastric | stomach |
| 20 | chr6:128829000-128832400 | Weak transcription | Right Atrium | heart |
| 21 | chr6:128829000-128834800 | Weak transcription | Fetal Stomach | stomach |
| 22 | chr6:128829000-128836400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 23 | chr6:128829200-128831400 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 24 | chr6:128829200-128832200 | Weak transcription | Fetal Lung | lung |
| 25 | chr6:128829400-128832400 | Weak transcription | Colon Smooth Muscle | Colon |
| 26 | chr6:128829400-128833800 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 27 | chr6:128829400-128836800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 28 | chr6:128829400-128836800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 29 | chr6:128829400-128837000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 30 | chr6:128829400-128837400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 31 | chr6:128829400-128839400 | Weak transcription | Colonic Mucosa | Colon |
| 32 | chr6:128829400-128839600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 33 | chr6:128829600-128831800 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 34 | chr6:128829600-128831800 | Enhancers | Liver | Liver |
| 35 | chr6:128829600-128831800 | Enhancers | NHLF | lung |
| 36 | chr6:128829600-128832800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 37 | chr6:128829600-128834000 | Enhancers | NHDF-Ad | bronchial |
| 38 | chr6:128829800-128837400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 39 | chr6:128830000-128832400 | Weak transcription | Ovary | ovary |
| 40 | chr6:128830000-128832400 | Weak transcription | Small Intestine | intestine |
| 41 | chr6:128830000-128834000 | Enhancers | HMEC | breast |
| 42 | chr6:128830000-128839600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 43 | chr6:128830400-128831400 | Enhancers | Duodenum Mucosa | Duodenum |
| 44 | chr6:128830400-128831400 | Flanking Active TSS | HUVEC | blood vessel |
| 45 | chr6:128830400-128831600 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 46 | chr6:128830400-128831800 | Enhancers | Brain Anterior Caudate | brain |
| 47 | chr6:128830400-128831800 | Enhancers | Brain Cingulate Gyrus | brain |
| 48 | chr6:128830400-128831800 | Enhancers | Brain Hippocampus Middle | brain |
| 49 | chr6:128830400-128833000 | Enhancers | Brain Substantia Nigra | brain |
| 50 | chr6:128830400-128833800 | Enhancers | Brain Angular Gyrus | brain |
