The 2.0 version of rSNPBase

Variant report

Variant rs62426791
Chromosome Location chr6:128839278-128839279
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:128817200-128839800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr6:128817200-128839800 Weak transcription Aorta Aorta
3 chr6:128825800-128840000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr6:128829400-128839400 Weak transcription Colonic Mucosa Colon
5 chr6:128829400-128839600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr6:128830000-128839600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr6:128831400-128840000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr6:128831600-128839800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr6:128832200-128839400 Enhancers Liver Liver
10 chr6:128832600-128839600 Weak transcription Gastric stomach
11 chr6:128832800-128839600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr6:128832800-128839800 Weak transcription Right Ventricle heart
13 chr6:128835000-128840600 Active TSS Fetal Brain Female brain
14 chr6:128835800-128839600 Enhancers Fetal Lung lung
15 chr6:128835800-128839800 Weak transcription Small Intestine intestine
16 chr6:128836400-128839600 Enhancers Rectal Smooth Muscle rectum
17 chr6:128836600-128839400 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr6:128836800-128839400 Enhancers Rectal Mucosa Donor 31 rectum
19 chr6:128837000-128840000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr6:128837200-128839800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr6:128837200-128842800 Active TSS Brain Inferior Temporal Lobe brain
22 chr6:128837400-128839600 Weak transcription Placenta Placenta
23 chr6:128837400-128839600 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr6:128837600-128839600 Enhancers iPS-15b Cell Line embryonic stem cell
25 chr6:128837600-128839600 Enhancers Fetal Kidney kidney
26 chr6:128837600-128839800 Weak transcription Psoas Muscle Psoas
27 chr6:128837600-128840000 Active TSS Duodenum Smooth Muscle Duodenum
28 chr6:128837800-128839400 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr6:128837800-128839600 Weak transcription H9 Cell Line embryonic stem cell
30 chr6:128837800-128839600 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr6:128838000-128839600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr6:128838000-128839600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr6:128838000-128839600 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr6:128838000-128839800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr6:128838200-128839400 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr6:128838200-128839400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr6:128838200-128839600 Flanking Active TSS NHLF lung
38 chr6:128838200-128842400 Active TSS Brain Cingulate Gyrus brain
39 chr6:128838400-128839400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr6:128838400-128839400 Weak transcription Colon Smooth Muscle Colon
41 chr6:128838400-128839400 Enhancers Fetal Heart heart
42 chr6:128838400-128839400 Weak transcription Fetal Thymus thymus
43 chr6:128838400-128839600 Weak transcription H1 Cell Line embryonic stem cell
44 chr6:128838400-128839600 Weak transcription Fetal Muscle Leg muscle
45 chr6:128838400-128839600 Weak transcription Left Ventricle heart
46 chr6:128838400-128839600 Weak transcription Pancreas Pancrea
47 chr6:128838400-128839800 Weak transcription Lung lung
48 chr6:128838400-128842200 Active TSS Duodenum Mucosa Duodenum
49 chr6:128838400-128843000 Active TSS Fetal Brain Male brain
50 chr6:128838600-128839400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015