Variant report
| Variant | rs17364090 |
|---|---|
| Chromosome Location | chr6:128832425-128832426 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:128815200-128833800 | Enhancers | Fetal Intestine Large | intestine |
| 2 | chr6:128817200-128839800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 3 | chr6:128817200-128839800 | Weak transcription | Aorta | Aorta |
| 4 | chr6:128820600-128833800 | Enhancers | Fetal Intestine Small | intestine |
| 5 | chr6:128821600-128836800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 6 | chr6:128823400-128832800 | Enhancers | Stomach Mucosa | stomach |
| 7 | chr6:128825800-128840000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 8 | chr6:128828600-128832800 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 9 | chr6:128828600-128833800 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 10 | chr6:128828600-128834000 | Enhancers | NH-A | brain |
| 11 | chr6:128829000-128834800 | Weak transcription | Fetal Stomach | stomach |
| 12 | chr6:128829000-128836400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 13 | chr6:128829400-128833800 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 14 | chr6:128829400-128836800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 15 | chr6:128829400-128836800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 16 | chr6:128829400-128837000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 17 | chr6:128829400-128837400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 18 | chr6:128829400-128839400 | Weak transcription | Colonic Mucosa | Colon |
| 19 | chr6:128829400-128839600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 20 | chr6:128829600-128832800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 21 | chr6:128829600-128834000 | Enhancers | NHDF-Ad | bronchial |
| 22 | chr6:128829800-128837400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 23 | chr6:128830000-128834000 | Enhancers | HMEC | breast |
| 24 | chr6:128830000-128839600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 25 | chr6:128830400-128833000 | Enhancers | Brain Substantia Nigra | brain |
| 26 | chr6:128830400-128833800 | Enhancers | Brain Angular Gyrus | brain |
| 27 | chr6:128830400-128836800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 28 | chr6:128830400-128837400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 29 | chr6:128830600-128833800 | Enhancers | Hela-S3 | cervix |
| 30 | chr6:128830600-128834200 | Enhancers | HepG2 | liver |
| 31 | chr6:128831000-128832600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 32 | chr6:128831000-128834200 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 33 | chr6:128831200-128832600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 34 | chr6:128831200-128835200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 35 | chr6:128831400-128832600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 36 | chr6:128831400-128834400 | Enhancers | HUVEC | blood vessel |
| 37 | chr6:128831400-128840000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 38 | chr6:128831600-128832600 | Weak transcription | HSMM | muscle |
| 39 | chr6:128831600-128834600 | Weak transcription | HSMMtube | muscle |
| 40 | chr6:128831600-128834800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 41 | chr6:128831600-128839800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 42 | chr6:128832200-128832600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 43 | chr6:128832200-128832800 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 44 | chr6:128832200-128832800 | Enhancers | Left Ventricle | heart |
| 45 | chr6:128832200-128832800 | Enhancers | Pancreas | Pancrea |
| 46 | chr6:128832200-128832800 | Enhancers | Psoas Muscle | Psoas |
| 47 | chr6:128832200-128832800 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 48 | chr6:128832200-128832800 | Flanking Active TSS | A549 | lung |
| 49 | chr6:128832200-128833000 | Flanking Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 50 | chr6:128832200-128833000 | Enhancers | Brain Anterior Caudate | brain |
