The 2.0 version of rSNPBase

Variant report

Variant rs62425737
Chromosome Location chr6:128830456-128830457
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:128808800-128830800 Weak transcription Lung lung
2 chr6:128815200-128833800 Enhancers Fetal Intestine Large intestine
3 chr6:128817200-128839800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr6:128817200-128839800 Weak transcription Aorta Aorta
5 chr6:128820600-128833800 Enhancers Fetal Intestine Small intestine
6 chr6:128821600-128836800 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr6:128823400-128832800 Enhancers Stomach Mucosa stomach
8 chr6:128825800-128831200 Weak transcription Psoas Muscle Psoas
9 chr6:128825800-128832400 Weak transcription Fetal Kidney kidney
10 chr6:128825800-128840000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr6:128826000-128830800 Weak transcription Right Ventricle heart
12 chr6:128826800-128831000 Weak transcription Left Ventricle heart
13 chr6:128827400-128830800 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr6:128827600-128831400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
15 chr6:128828200-128831200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr6:128828400-128831600 Enhancers HSMMtube muscle
17 chr6:128828600-128831000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr6:128828600-128831400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr6:128828600-128831400 Enhancers Brain Inferior Temporal Lobe brain
20 chr6:128828600-128831600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
21 chr6:128828600-128831600 Enhancers HSMM muscle
22 chr6:128828600-128832400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr6:128828600-128832800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
24 chr6:128828600-128833800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr6:128828600-128834000 Enhancers NH-A brain
26 chr6:128828800-128831200 Weak transcription Esophagus oesophagus
27 chr6:128829000-128830800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr6:128829000-128830800 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr6:128829000-128832400 Weak transcription Gastric stomach
30 chr6:128829000-128832400 Weak transcription Right Atrium heart
31 chr6:128829000-128834800 Weak transcription Fetal Stomach stomach
32 chr6:128829000-128836400 Weak transcription Rectal Smooth Muscle rectum
33 chr6:128829200-128830600 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr6:128829200-128831400 Enhancers Rectal Mucosa Donor 31 rectum
35 chr6:128829200-128832200 Weak transcription Fetal Lung lung
36 chr6:128829400-128830800 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr6:128829400-128831000 Weak transcription Fetal Heart heart
38 chr6:128829400-128831000 Weak transcription Stomach Smooth Muscle stomach
39 chr6:128829400-128831000 Enhancers NHEK skin
40 chr6:128829400-128832400 Weak transcription Colon Smooth Muscle Colon
41 chr6:128829400-128833800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr6:128829400-128836800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr6:128829400-128836800 Weak transcription iPS-18 Cell Line embryonic stem cell
44 chr6:128829400-128837000 Weak transcription ES-I3 Cell Line embryonic stem cell
45 chr6:128829400-128837400 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr6:128829400-128839400 Weak transcription Colonic Mucosa Colon
47 chr6:128829400-128839600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr6:128829600-128830800 Weak transcription Pancreas Pancrea
49 chr6:128829600-128831800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr6:128829600-128831800 Enhancers Liver Liver

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015