The 2.0 version of rSNPBase

Variant report

Variant rs62426793
Chromosome Location chr6:128841648-128841649
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:128837200-128842800 Active TSS Brain Inferior Temporal Lobe brain
2 chr6:128838200-128842400 Active TSS Brain Cingulate Gyrus brain
3 chr6:128838400-128842200 Active TSS Duodenum Mucosa Duodenum
4 chr6:128838400-128843000 Active TSS Fetal Brain Male brain
5 chr6:128838600-128842200 Active TSS HMEC breast
6 chr6:128838600-128842400 Active TSS Fetal Intestine Small intestine
7 chr6:128838600-128842600 Active TSS Brain Hippocampus Middle brain
8 chr6:128838600-128842600 Active TSS Fetal Intestine Large intestine
9 chr6:128838600-128842800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr6:128838600-128842800 Active TSS Brain Angular Gyrus brain
11 chr6:128838800-128842400 Active TSS Rectal Mucosa Donor 29 rectum
12 chr6:128838800-128842600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr6:128838800-128842800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
14 chr6:128838800-128842800 Active TSS Stomach Smooth Muscle stomach
15 chr6:128839000-128842400 Active TSS NH-A brain
16 chr6:128839200-128842800 Active TSS Right Atrium heart
17 chr6:128839400-128842000 Active TSS Fetal Thymus thymus
18 chr6:128839400-128842200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
19 chr6:128839400-128842600 Active TSS ES-I3 Cell Line embryonic stem cell
20 chr6:128839400-128842600 Active TSS HUES6 Cell Line embryonic stem cell
21 chr6:128839400-128842600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
22 chr6:128839400-128842600 Active TSS Brain Anterior Caudate brain
23 chr6:128839400-128842600 Active TSS Colonic Mucosa Colon
24 chr6:128839400-128842600 Active TSS Fetal Heart heart
25 chr6:128839400-128842600 Active TSS Rectal Mucosa Donor 31 rectum
26 chr6:128839400-128842600 Active TSS NHDF-Ad bronchial
27 chr6:128839400-128842800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr6:128839400-128842800 Active TSS HSMMtube muscle
29 chr6:128839600-128842200 Active TSS Gastric stomach
30 chr6:128839600-128842400 Active TSS Colon Smooth Muscle Colon
31 chr6:128839600-128842400 Active TSS Ovary ovary
32 chr6:128839600-128842400 Active TSS Sigmoid Colon Sigmoid Colon
33 chr6:128839600-128842400 Bivalent/Poised TSS HepG2 liver
34 chr6:128839600-128842400 Active TSS NHEK skin
35 chr6:128839600-128842600 Active TSS Left Ventricle heart
36 chr6:128839600-128842600 Active TSS Pancreas Pancrea
37 chr6:128839600-128842600 Active TSS Rectal Smooth Muscle rectum
38 chr6:128839600-128842600 Active TSS A549 lung
39 chr6:128839600-128842600 Active TSS NHLF lung
40 chr6:128839800-128841800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr6:128839800-128842400 Active TSS ES-WA7 Cell Line embryonic stem cell
42 chr6:128839800-128842400 Active TSS Aorta Aorta
43 chr6:128839800-128842400 Active TSS Lung lung
44 chr6:128839800-128842400 Active TSS Small Intestine intestine
45 chr6:128839800-128842600 Active TSS H9 Cell Line embryonic stem cell
46 chr6:128839800-128842600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr6:128839800-128842600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
48 chr6:128839800-128842600 Active TSS Breast Myoepithelial Primary Cells Breast
49 chr6:128839800-128842600 Active TSS Psoas Muscle Psoas
50 chr6:128840000-128841800 Flanking Active TSS Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015