The 2.0 version of rSNPBase

Variant report

Variant rs11164044
Chromosome Location chr1:85167554-85167555
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85163000-85168400 Enhancers Rectal Smooth Muscle rectum
2 chr1:85163600-85168400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:85164200-85167800 Enhancers Primary T cells from cord blood blood
4 chr1:85164400-85167800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr1:85164800-85168000 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr1:85164800-85169600 Weak transcription Fetal Lung lung
7 chr1:85164800-85170200 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr1:85164800-85170800 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr1:85164800-85170800 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr1:85164800-85171000 Weak transcription Fetal Kidney kidney
11 chr1:85165000-85169600 Weak transcription H1 Cell Line embryonic stem cell
12 chr1:85165200-85170200 Weak transcription H9 Cell Line embryonic stem cell
13 chr1:85165200-85179000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:85166000-85168400 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr1:85166000-85168400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr1:85166200-85168400 Weak transcription Fetal Muscle Leg muscle
17 chr1:85166200-85169600 Weak transcription Fetal Intestine Large intestine
18 chr1:85166200-85170200 Weak transcription Primary B cells from peripheral blood blood
19 chr1:85166200-85170600 Weak transcription K562 blood
20 chr1:85166200-85173400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr1:85166400-85168200 Weak transcription Colon Smooth Muscle Colon
22 chr1:85166400-85169600 Weak transcription Fetal Intestine Small intestine
23 chr1:85166400-85170200 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr1:85166400-85170400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr1:85167200-85167600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:85167200-85167600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:85167200-85167600 Active TSS Aorta Aorta
28 chr1:85167200-85167600 Active TSS Fetal Brain Female brain
29 chr1:85167200-85167600 Active TSS Fetal Muscle Trunk muscle
30 chr1:85167200-85167600 Active TSS Psoas Muscle Psoas
31 chr1:85167200-85167600 Active TSS Right Atrium heart
32 chr1:85167200-85167600 Active TSS Skeletal Muscle Female skeletal muscle
33 chr1:85167200-85167600 Active TSS Stomach Smooth Muscle stomach
34 chr1:85167200-85167600 Active TSS HSMMtube muscle
35 chr1:85167200-85168000 Enhancers Primary T helper naive cells fromperipheralblood blood
36 chr1:85167200-85168600 Enhancers HUES48 Cell Line embryonic stem cell
37 chr1:85167200-85168600 Enhancers Fetal Stomach stomach
38 chr1:85167200-85168800 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr1:85167400-85167600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:85167400-85167600 Enhancers Duodenum Smooth Muscle Duodenum
41 chr1:85167400-85167600 Enhancers HSMM muscle
42 chr1:85167400-85167800 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr1:85167400-85168200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:85167400-85168800 Enhancers iPS-20b Cell Line embryonic stem cell
45 chr1:85167400-85168800 Enhancers Fetal Brain Male brain
46 chr1:85167400-85169600 Weak transcription Primary B cells from cord blood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015