The 2.0 version of rSNPBase

Variant report

Variant rs6659803
Chromosome Location chr1:85115076-85115077
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85087000-85147400 Weak transcription Gastric stomach
2 chr1:85099000-85115600 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr1:85099000-85123400 Weak transcription H9 Cell Line embryonic stem cell
4 chr1:85099200-85121400 Weak transcription NHDF-Ad bronchial
5 chr1:85099200-85138200 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr1:85099400-85131200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:85099600-85122600 Weak transcription Fetal Brain Male brain
8 chr1:85100600-85116800 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr1:85101000-85123200 Weak transcription Fetal Kidney kidney
10 chr1:85101000-85124400 Weak transcription Hela-S3 cervix
11 chr1:85101600-85121000 Weak transcription Placenta Placenta
12 chr1:85104600-85116000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr1:85105000-85119000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:85106000-85116600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:85106200-85140400 Weak transcription NHEK skin
16 chr1:85106400-85155400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:85106600-85116800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:85107800-85115400 Weak transcription Brain Cingulate Gyrus brain
19 chr1:85108000-85123200 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr1:85108000-85155000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr1:85108200-85119000 Weak transcription Right Ventricle heart
22 chr1:85108200-85123400 Weak transcription Esophagus oesophagus
23 chr1:85108200-85128800 Weak transcription GM12878-XiMat blood
24 chr1:85108400-85115200 Weak transcription Brain Anterior Caudate brain
25 chr1:85108400-85121400 Weak transcription Left Ventricle heart
26 chr1:85108400-85121600 Weak transcription Brain Germinal Matrix brain
27 chr1:85108600-85116000 Weak transcription H1 Cell Line embryonic stem cell
28 chr1:85109000-85116400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:85109000-85121200 Weak transcription HSMMtube muscle
30 chr1:85109200-85133000 Weak transcription Pancreas Pancrea
31 chr1:85109400-85116000 Weak transcription Thymus Thymus
32 chr1:85109600-85115800 Weak transcription Fetal Lung lung
33 chr1:85109600-85123200 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr1:85110200-85123000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:85110400-85121400 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr1:85110600-85115200 Weak transcription NHLF lung
37 chr1:85110800-85118000 Strong transcription HUES64 Cell Line embryonic stem cell
38 chr1:85110800-85129400 Strong transcription Fetal Thymus thymus
39 chr1:85111000-85116000 Weak transcription Primary hematopoietic stem cells blood
40 chr1:85111200-85119400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr1:85111200-85123800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr1:85111400-85115400 Weak transcription Brain Inferior Temporal Lobe brain
43 chr1:85111400-85128400 Strong transcription HUES48 Cell Line embryonic stem cell
44 chr1:85111400-85131400 Weak transcription HSMM muscle
45 chr1:85111600-85123600 Weak transcription Primary monocytes fromperipheralblood blood
46 chr1:85111600-85127800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr1:85111800-85152000 Weak transcription Aorta Aorta
48 chr1:85112400-85117000 Strong transcription Liver Liver
49 chr1:85112400-85117200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr1:85112400-85129000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015