The 2.0 version of rSNPBase

Variant report

Variant rs11165349
Chromosome Location chr1:95696709-95696710
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95670600-95698200 Weak transcription Aorta Aorta
2 chr1:95682600-95698000 Weak transcription Fetal Intestine Large intestine
3 chr1:95688800-95698800 Weak transcription Psoas Muscle Psoas
4 chr1:95689200-95698000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr1:95689400-95698200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr1:95692400-95698200 Weak transcription A549 lung
7 chr1:95692600-95696800 Enhancers Brain Angular Gyrus brain
8 chr1:95693000-95698200 Weak transcription Fetal Heart heart
9 chr1:95693200-95698000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr1:95693200-95698200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr1:95693400-95698200 Weak transcription Adipose Nuclei Adipose
12 chr1:95693400-95698400 Weak transcription HMEC breast
13 chr1:95693600-95696800 Enhancers Brain Cingulate Gyrus brain
14 chr1:95693600-95697000 Enhancers Brain Substantia Nigra brain
15 chr1:95693600-95699000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr1:95694000-95698400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:95695000-95698000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:95695000-95698200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:95695000-95698200 Weak transcription Brain Inferior Temporal Lobe brain
20 chr1:95695000-95698200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr1:95695000-95698200 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr1:95695600-95697600 Enhancers Liver Liver
23 chr1:95695600-95697600 Enhancers HepG2 liver
24 chr1:95696200-95698200 Weak transcription Ovary ovary
25 chr1:95696400-95697000 Enhancers Fetal Intestine Small intestine
26 chr1:95696400-95698200 Weak transcription Brain Hippocampus Middle brain
27 chr1:95696600-95697200 Active TSS Right Atrium heart
28 chr1:95696600-95698200 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr1:95696600-95698200 Enhancers Brain Anterior Caudate brain
30 chr1:95696600-95698800 Weak transcription Left Ventricle heart
31 chr1:95696600-95698800 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015