The 2.0 version of rSNPBase

Variant report

Variant rs7528790
Chromosome Location chr1:95709074-95709075
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95700600-95712000 Weak transcription iPS-18 Cell Line embryonic stem cell
2 chr1:95700600-95713200 Weak transcription HMEC breast
3 chr1:95700600-95715000 Weak transcription HUVEC blood vessel
4 chr1:95700600-95719800 Weak transcription NHDF-Ad bronchial
5 chr1:95702600-95719800 Weak transcription Colon Smooth Muscle Colon
6 chr1:95703400-95719000 Weak transcription Small Intestine intestine
7 chr1:95703600-95716200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr1:95703600-95720800 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr1:95703800-95716400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr1:95704200-95715400 Weak transcription Psoas Muscle Psoas
11 chr1:95705000-95710200 Strong transcription Fetal Intestine Large intestine
12 chr1:95705000-95710800 Strong transcription Primary T helper cells fromperipheralblood blood
13 chr1:95705200-95709400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:95705200-95710200 Strong transcription Stomach Smooth Muscle stomach
15 chr1:95705200-95710400 Strong transcription Primary B cells from peripheral blood blood
16 chr1:95705200-95715200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
17 chr1:95705400-95710000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:95705400-95710200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr1:95705400-95710200 Strong transcription Rectal Mucosa Donor 29 rectum
20 chr1:95705400-95710400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
21 chr1:95705400-95710400 Strong transcription Osteobl bone
22 chr1:95705600-95710600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:95705600-95710600 Strong transcription Placenta Placenta
24 chr1:95705600-95710800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:95705600-95720800 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr1:95706600-95709200 Strong transcription NHLF lung
27 chr1:95706800-95712200 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr1:95707000-95709800 Weak transcription NHEK skin
29 chr1:95707000-95719000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr1:95707200-95710400 Strong transcription Primary T cells from cord blood blood
31 chr1:95707200-95715200 Strong transcription Monocytes-CD14+_RO01746 blood
32 chr1:95707200-95717800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr1:95707400-95710400 Strong transcription HUES6 Cell Line embryonic stem cell
34 chr1:95707400-95712200 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr1:95707400-95714400 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr1:95707400-95714800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr1:95707400-95717800 Weak transcription Esophagus oesophagus
38 chr1:95707400-95719200 Weak transcription Spleen Spleen
39 chr1:95707400-95719600 Weak transcription Lung lung
40 chr1:95707400-95719800 Weak transcription Gastric stomach
41 chr1:95707400-95720200 Weak transcription HSMMtube muscle
42 chr1:95707400-95722600 Weak transcription Aorta Aorta
43 chr1:95707400-95722800 Weak transcription Pancreas Pancrea
44 chr1:95707400-95727600 Weak transcription Brain Angular Gyrus brain
45 chr1:95707600-95709200 Weak transcription HepG2 liver
46 chr1:95707600-95709800 Weak transcription Primary monocytes fromperipheralblood blood
47 chr1:95707600-95709800 Weak transcription Rectal Smooth Muscle rectum
48 chr1:95707600-95714400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr1:95707600-95716000 Weak transcription Colonic Mucosa Colon
50 chr1:95707600-95717600 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015