The 2.0 version of rSNPBase

Variant report

Variant rs3820345
Chromosome Location chr1:95713175-95713176
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95700600-95713200 Weak transcription HMEC breast
2 chr1:95700600-95715000 Weak transcription HUVEC blood vessel
3 chr1:95700600-95719800 Weak transcription NHDF-Ad bronchial
4 chr1:95702600-95719800 Weak transcription Colon Smooth Muscle Colon
5 chr1:95703400-95719000 Weak transcription Small Intestine intestine
6 chr1:95703600-95716200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr1:95703600-95720800 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr1:95703800-95716400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr1:95704200-95715400 Weak transcription Psoas Muscle Psoas
10 chr1:95705200-95715200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
11 chr1:95705600-95720800 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr1:95707000-95719000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr1:95707200-95715200 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr1:95707200-95717800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr1:95707400-95714400 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr1:95707400-95714800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:95707400-95717800 Weak transcription Esophagus oesophagus
18 chr1:95707400-95719200 Weak transcription Spleen Spleen
19 chr1:95707400-95719600 Weak transcription Lung lung
20 chr1:95707400-95719800 Weak transcription Gastric stomach
21 chr1:95707400-95720200 Weak transcription HSMMtube muscle
22 chr1:95707400-95722600 Weak transcription Aorta Aorta
23 chr1:95707400-95722800 Weak transcription Pancreas Pancrea
24 chr1:95707400-95727600 Weak transcription Brain Angular Gyrus brain
25 chr1:95707600-95714400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:95707600-95716000 Weak transcription Colonic Mucosa Colon
27 chr1:95707600-95717600 Weak transcription GM12878-XiMat blood
28 chr1:95707600-95720000 Weak transcription Muscle Satellite Cultured Cells --
29 chr1:95707800-95714400 Weak transcription Fetal Stomach stomach
30 chr1:95707800-95714800 Weak transcription Thymus Thymus
31 chr1:95707800-95715200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:95707800-95717400 Weak transcription Placenta Amnion Placenta Amnion
33 chr1:95707800-95719800 Weak transcription Brain Hippocampus Middle brain
34 chr1:95708000-95713600 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr1:95708000-95715000 Weak transcription Right Ventricle heart
36 chr1:95708000-95718400 Weak transcription Brain Inferior Temporal Lobe brain
37 chr1:95708000-95718400 Weak transcription Fetal Brain Male brain
38 chr1:95708000-95719600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr1:95708000-95720000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr1:95708200-95713400 Weak transcription Fetal Heart heart
41 chr1:95708200-95714600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr1:95708200-95717400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr1:95708200-95717600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:95708200-95718800 Weak transcription Fetal Brain Female brain
45 chr1:95708200-95719600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr1:95708400-95723400 Weak transcription Fetal Intestine Small intestine
47 chr1:95708600-95713800 Enhancers Brain Germinal Matrix brain
48 chr1:95709000-95715000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:95709000-95719600 Weak transcription H1 Cell Line embryonic stem cell
50 chr1:95709200-95715400 Weak transcription NHLF lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015