The 2.0 version of rSNPBase

Variant report

Variant rs11167705
Chromosome Location chr5:154290751-154290752
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:154262800-154300800 Strong transcription Fetal Brain Female brain
2 chr5:154264000-154312800 Strong transcription Fetal Adrenal Gland Adrenal Gland
3 chr5:154266200-154312200 Strong transcription Fetal Thymus thymus
4 chr5:154266200-154316600 Weak transcription Stomach Mucosa stomach
5 chr5:154266400-154293600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr5:154266400-154311200 Strong transcription Primary monocytes fromperipheralblood blood
7 chr5:154266400-154312800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
8 chr5:154266400-154315600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr5:154266600-154292600 Strong transcription Primary T helper naive cells fromperipheralblood blood
10 chr5:154266600-154292800 Strong transcription Left Ventricle heart
11 chr5:154266600-154293000 Strong transcription Dnd41 blood
12 chr5:154266600-154293200 Strong transcription Placenta Placenta
13 chr5:154266600-154294600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr5:154266600-154312800 Strong transcription Fetal Intestine Large intestine
15 chr5:154266600-154313200 Strong transcription Primary T regulatory cells fromperipheralblood blood
16 chr5:154266600-154313600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr5:154266800-154293000 Strong transcription Primary T helper cells PMA-I stimulated --
18 chr5:154266800-154293600 Strong transcription Stomach Smooth Muscle stomach
19 chr5:154267000-154293600 Strong transcription Primary T cells from cord blood blood
20 chr5:154267000-154294400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
21 chr5:154267000-154304400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr5:154267000-154312800 Strong transcription Primary T cells fromperipheralblood blood
23 chr5:154267200-154293000 Strong transcription iPS-18 Cell Line embryonic stem cell
24 chr5:154267200-154311800 Strong transcription Primary B cells from peripheral blood blood
25 chr5:154267200-154312800 Strong transcription H1 Cell Line embryonic stem cell
26 chr5:154267400-154299000 Strong transcription Fetal Stomach stomach
27 chr5:154267600-154300000 Strong transcription Fetal Muscle Leg muscle
28 chr5:154267600-154301600 Strong transcription iPS-20b Cell Line embryonic stem cell
29 chr5:154267600-154313200 Strong transcription Duodenum Mucosa Duodenum
30 chr5:154267800-154315600 Strong transcription Primary T helper cells fromperipheralblood blood
31 chr5:154268000-154296600 Weak transcription Right Atrium heart
32 chr5:154268000-154315600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr5:154268200-154300200 Strong transcription Duodenum Smooth Muscle Duodenum
34 chr5:154268200-154315000 Strong transcription HUES6 Cell Line embryonic stem cell
35 chr5:154268200-154315600 Strong transcription Primary hematopoietic stem cells short term culture blood
36 chr5:154268200-154316200 Strong transcription HUES64 Cell Line embryonic stem cell
37 chr5:154268800-154312800 Strong transcription Breast Myoepithelial Primary Cells Breast
38 chr5:154269600-154293200 Strong transcription Monocytes-CD14+_RO01746 blood
39 chr5:154269800-154292200 Weak transcription Fetal Heart heart
40 chr5:154269800-154313600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr5:154269800-154315400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr5:154269800-154316200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr5:154273600-154316600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr5:154275000-154293000 Strong transcription Osteobl bone
45 chr5:154275000-154300800 Strong transcription Primary B cells from cord blood blood
46 chr5:154275400-154313400 Strong transcription HUES48 Cell Line embryonic stem cell
47 chr5:154275800-154291400 Strong transcription Sigmoid Colon Sigmoid Colon
48 chr5:154276200-154314600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr5:154277800-154293000 Strong transcription Brain Inferior Temporal Lobe brain
50 chr5:154279000-154304400 Strong transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015