Variant report

Variant rs11181457
Chromosome Location chr12:42751572-42751573
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42720800-42844400 Weak transcription Small Intestine intestine
2 chr12:42721000-42758000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr12:42721600-42751800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr12:42721600-42769000 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr12:42721600-42778600 Weak transcription Spleen Spleen
6 chr12:42721600-42800800 Weak transcription Psoas Muscle Psoas
7 chr12:42721600-42803600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr12:42721800-42756200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr12:42721800-42769600 Weak transcription Brain Substantia Nigra brain
10 chr12:42721800-42769800 Weak transcription Brain Cingulate Gyrus brain
11 chr12:42721800-42797000 Weak transcription NHLF lung
12 chr12:42721800-42803600 Weak transcription Gastric stomach
13 chr12:42722000-42769600 Weak transcription Brain Anterior Caudate brain
14 chr12:42722000-42769600 Weak transcription Stomach Smooth Muscle stomach
15 chr12:42722000-42772600 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr12:42722000-42793200 Weak transcription Fetal Kidney kidney
17 chr12:42722200-42752800 Weak transcription Rectal Smooth Muscle rectum
18 chr12:42722200-42769200 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr12:42724400-42755400 Weak transcription Pancreas Pancrea
20 chr12:42730800-42769600 Weak transcription NH-A brain
21 chr12:42731000-42757400 Weak transcription Brain Germinal Matrix brain
22 chr12:42731000-42768800 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr12:42731200-42754000 Weak transcription HUVEC blood vessel
24 chr12:42731400-42769600 Weak transcription Fetal Lung lung
25 chr12:42731800-42770400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr12:42732000-42754200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr12:42732000-42754200 Weak transcription Lung lung
28 chr12:42732200-42781200 Weak transcription Fetal Brain Female brain
29 chr12:42732200-42794400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr12:42732400-42763600 Weak transcription ES-WA7 Cell Line embryonic stem cell
31 chr12:42732400-42769600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr12:42733400-42796800 Weak transcription Brain Hippocampus Middle brain
33 chr12:42738000-42754000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr12:42738000-42787400 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr12:42738200-42823200 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr12:42742000-42758400 Weak transcription Stomach Mucosa stomach
37 chr12:42742600-42758800 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr12:42743000-42755000 Weak transcription Brain Angular Gyrus brain
39 chr12:42743200-42755600 Weak transcription NHEK skin
40 chr12:42745000-42751800 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr12:42745000-42753000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr12:42745000-42753400 Strong transcription HUES64 Cell Line embryonic stem cell
43 chr12:42745200-42753600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
44 chr12:42745200-42758800 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr12:42745400-42752000 Strong transcription Primary T helper cells fromperipheralblood blood
46 chr12:42745400-42753600 Strong transcription Hela-S3 cervix
47 chr12:42745600-42751800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr12:42745600-42751800 Strong transcription Fetal Thymus thymus
49 chr12:42745600-42752000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr12:42745600-42753600 Strong transcription Primary T cells fromperipheralblood blood

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