Variant report

Variant rs12227738
Chromosome Location chr12:42747890-42747891
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42720800-42844400 Weak transcription Small Intestine intestine
2 chr12:42721000-42758000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr12:42721600-42748600 Weak transcription Muscle Satellite Cultured Cells --
4 chr12:42721600-42750000 Weak transcription Aorta Aorta
5 chr12:42721600-42750600 Weak transcription Brain Inferior Temporal Lobe brain
6 chr12:42721600-42751800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr12:42721600-42769000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr12:42721600-42778600 Weak transcription Spleen Spleen
9 chr12:42721600-42800800 Weak transcription Psoas Muscle Psoas
10 chr12:42721600-42803600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr12:42721800-42750200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr12:42721800-42756200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr12:42721800-42769600 Weak transcription Brain Substantia Nigra brain
14 chr12:42721800-42769800 Weak transcription Brain Cingulate Gyrus brain
15 chr12:42721800-42797000 Weak transcription NHLF lung
16 chr12:42721800-42803600 Weak transcription Gastric stomach
17 chr12:42722000-42769600 Weak transcription Brain Anterior Caudate brain
18 chr12:42722000-42769600 Weak transcription Stomach Smooth Muscle stomach
19 chr12:42722000-42772600 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr12:42722000-42793200 Weak transcription Fetal Kidney kidney
21 chr12:42722200-42749800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr12:42722200-42750200 Weak transcription Colon Smooth Muscle Colon
23 chr12:42722200-42752800 Weak transcription Rectal Smooth Muscle rectum
24 chr12:42722200-42769200 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr12:42724400-42755400 Weak transcription Pancreas Pancrea
26 chr12:42726200-42749400 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr12:42730400-42750000 Weak transcription Ovary ovary
28 chr12:42730600-42749800 Weak transcription Left Ventricle heart
29 chr12:42730600-42750000 Weak transcription H1 Cell Line embryonic stem cell
30 chr12:42730800-42748800 Weak transcription Adipose Nuclei Adipose
31 chr12:42730800-42769600 Weak transcription NH-A brain
32 chr12:42731000-42748200 Weak transcription HMEC breast
33 chr12:42731000-42757400 Weak transcription Brain Germinal Matrix brain
34 chr12:42731000-42768800 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr12:42731200-42754000 Weak transcription HUVEC blood vessel
36 chr12:42731400-42769600 Weak transcription Fetal Lung lung
37 chr12:42731800-42770400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr12:42732000-42754200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr12:42732000-42754200 Weak transcription Lung lung
40 chr12:42732200-42748000 Weak transcription Fetal Stomach stomach
41 chr12:42732200-42749200 Weak transcription Fetal Muscle Leg muscle
42 chr12:42732200-42749600 Weak transcription Placenta Placenta
43 chr12:42732200-42781200 Weak transcription Fetal Brain Female brain
44 chr12:42732200-42794400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr12:42732400-42763600 Weak transcription ES-WA7 Cell Line embryonic stem cell
46 chr12:42732400-42769600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr12:42732600-42748200 Weak transcription Liver Liver
48 chr12:42732600-42750000 Weak transcription Right Ventricle heart
49 chr12:42733200-42749800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr12:42733400-42748200 Weak transcription HSMM muscle

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