Variant report

Variant rs2305422
Chromosome Location chr12:42866065-42866066
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42831800-42876400 Weak transcription Psoas Muscle Psoas
2 chr12:42836000-42875800 Weak transcription Stomach Mucosa stomach
3 chr12:42837000-42868800 Weak transcription Esophagus oesophagus
4 chr12:42850000-42866400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr12:42853400-42869200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr12:42854000-42868600 Weak transcription Right Ventricle heart
7 chr12:42854200-42867400 Weak transcription NHLF lung
8 chr12:42860200-42866800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr12:42860200-42868800 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr12:42860200-42870400 Weak transcription Pancreas Pancrea
11 chr12:42860200-42876200 Weak transcription Gastric stomach
12 chr12:42861400-42876000 Weak transcription Lung lung
13 chr12:42861600-42866200 Weak transcription Ovary ovary
14 chr12:42862400-42867200 Genic enhancers HUVEC blood vessel
15 chr12:42862400-42867400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr12:42862800-42876000 Weak transcription Aorta Aorta
17 chr12:42863200-42868400 Weak transcription Rectal Smooth Muscle rectum
18 chr12:42863200-42868800 Weak transcription Colon Smooth Muscle Colon
19 chr12:42863400-42866200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr12:42863400-42866200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr12:42863400-42866200 Genic enhancers Primary B cells from peripheral blood blood
22 chr12:42863400-42866200 Weak transcription Right Atrium heart
23 chr12:42863400-42866200 Strong transcription NH-A brain
24 chr12:42863400-42866600 Weak transcription Muscle Satellite Cultured Cells --
25 chr12:42863400-42866600 Weak transcription NHEK skin
26 chr12:42863400-42866800 Strong transcription Fetal Muscle Leg muscle
27 chr12:42863400-42866800 Weak transcription Stomach Smooth Muscle stomach
28 chr12:42863400-42867800 Enhancers Fetal Kidney kidney
29 chr12:42863400-42868800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr12:42863400-42869200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr12:42863400-42869600 Enhancers Fetal Heart heart
32 chr12:42863400-42874200 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr12:42863400-42875600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr12:42863400-42876000 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr12:42863600-42866200 Weak transcription Fetal Intestine Large intestine
36 chr12:42863600-42867200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr12:42863800-42866800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr12:42863800-42867600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
39 chr12:42864000-42866200 Enhancers GM12878-XiMat blood
40 chr12:42864000-42866400 Genic enhancers HUES48 Cell Line embryonic stem cell
41 chr12:42864000-42866400 Genic enhancers HUES6 Cell Line embryonic stem cell
42 chr12:42864000-42866600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr12:42864000-42868800 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr12:42864000-42869000 Weak transcription Small Intestine intestine
45 chr12:42864200-42866200 Weak transcription Left Ventricle heart
46 chr12:42864200-42868200 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr12:42864200-42868800 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr12:42864400-42866600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr12:42864400-42866800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr12:42864400-42866800 Weak transcription Fetal Lung lung

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