The 2.0 version of rSNPBase

Variant report

Variant rs61926588
Chromosome Location chr12:42799854-42799855
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42720800-42844400 Weak transcription Small Intestine intestine
2 chr12:42721600-42800800 Weak transcription Psoas Muscle Psoas
3 chr12:42721600-42803600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr12:42721800-42803600 Weak transcription Gastric stomach
5 chr12:42738200-42823200 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr12:42763800-42804200 Weak transcription Colon Smooth Muscle Colon
7 chr12:42767200-42836200 Weak transcription Esophagus oesophagus
8 chr12:42770200-42815800 Weak transcription Fetal Lung lung
9 chr12:42770400-42816600 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr12:42771200-42801000 Weak transcription NH-A brain
11 chr12:42771800-42803000 Weak transcription Brain Anterior Caudate brain
12 chr12:42777000-42802600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr12:42780200-42802800 Weak transcription Right Ventricle heart
14 chr12:42780200-42836000 Weak transcription Rectal Smooth Muscle rectum
15 chr12:42780400-42804200 Weak transcription K562 blood
16 chr12:42780400-42811200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr12:42782000-42802000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr12:42782800-42803400 Weak transcription Spleen Spleen
19 chr12:42782800-42804200 Weak transcription Fetal Brain Female brain
20 chr12:42782800-42807200 Weak transcription Brain Inferior Temporal Lobe brain
21 chr12:42783000-42836000 Weak transcription Lung lung
22 chr12:42785400-42836000 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr12:42789600-42812200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr12:42789600-42836200 Weak transcription Pancreas Pancrea
25 chr12:42790600-42802600 Strong transcription Monocytes-CD14+_RO01746 blood
26 chr12:42790600-42803800 Weak transcription Colonic Mucosa Colon
27 chr12:42792000-42800000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr12:42793200-42802200 Weak transcription Brain Angular Gyrus brain
29 chr12:42793200-42806800 Weak transcription Brain Substantia Nigra brain
30 chr12:42793800-42801000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr12:42793800-42802600 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr12:42793800-42803400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr12:42793800-42840400 Weak transcription ES-WA7 Cell Line embryonic stem cell
34 chr12:42794000-42802400 Weak transcription HUVEC blood vessel
35 chr12:42794400-42803800 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr12:42794800-42804200 Weak transcription Fetal Kidney kidney
37 chr12:42795000-42813600 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr12:42795400-42800600 Weak transcription HMEC breast
39 chr12:42795400-42804000 Weak transcription Placenta Placenta
40 chr12:42795400-42834600 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr12:42795600-42800800 Weak transcription Primary B cells from peripheral blood blood
42 chr12:42795600-42806000 Weak transcription Primary T cells from cord blood blood
43 chr12:42795600-42811400 Weak transcription Adipose Nuclei Adipose
44 chr12:42795600-42811800 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr12:42795600-42820400 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr12:42795600-42820600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr12:42795600-42825800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr12:42795600-42834400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr12:42795800-42801000 Weak transcription Fetal Intestine Large intestine
50 chr12:42795800-42801400 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015